> gf
GenomicFiles object with 3 ranges and 8 files:
files: ERR127306_chr14.bam, ERR127307_chr14.bam, ..., ERR127304_chr14.bam, ERR127305_chr14.bam
detail: use files(), rowRanges(), colData(), ...
> c(gf, gf)
Error in validObject(ans) :
invalid class "GenomicFiles" object: 'length(files(object))' must equal 'nrow(colData(object))'
> sessionInfo()
R Under development (unstable) (2020-03-17 r77988)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Mojave 10.14.6
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.0/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats4 parallel stats graphics grDevices utils datasets
[8] methods base
other attached packages:
[1] RNAseqData.HNRNPC.bam.chr14_0.25.0 GenomicFiles_1.23.1
[3] rtracklayer_1.47.0 Rsamtools_2.3.5
[5] Biostrings_2.55.6 XVector_0.27.1
[7] SummarizedExperiment_1.17.3 DelayedArray_0.13.7
[9] BiocParallel_1.21.2 matrixStats_0.56.0
[11] Biobase_2.47.3 GenomicRanges_1.39.2
[13] GenomeInfoDb_1.23.13 IRanges_2.21.5
[15] S4Vectors_0.25.13 BiocGenerics_0.33.0
[17] rmarkdown_2.1
loaded via a namespace (and not attached):
[1] Rcpp_1.0.4 lattice_0.20-40 prettyunits_1.1.1
[4] assertthat_0.2.1 digest_0.6.25 BiocFileCache_1.11.4
[7] R6_2.4.1 RSQLite_2.2.0 evaluate_0.14
[10] httr_1.4.1 pillar_1.4.3 zlibbioc_1.33.1
[13] rlang_0.4.5 GenomicFeatures_1.39.6 progress_1.2.2
[16] curl_4.3 blob_1.2.1 Matrix_1.2-18
[19] startup_0.14.0 stringr_1.4.0 RCurl_1.98-1.1
[22] bit_1.1-15.2 biomaRt_2.43.3 compiler_4.0.0
[25] xfun_0.12 pkgconfig_2.0.3 askpass_1.1
[28] htmltools_0.4.0 tidyselect_1.0.0 openssl_1.4.1
[31] tibble_2.1.3 GenomeInfoDbData_1.2.2 codetools_0.2-16
[34] XML_3.99-0.3 crayon_1.3.4 dplyr_0.8.5
[37] dbplyr_1.4.2 rappdirs_0.3.1 GenomicAlignments_1.23.1
[40] bitops_1.0-6 grid_4.0.0 DBI_1.1.0
[43] magrittr_1.5 stringi_1.4.6 vctrs_0.2.4
[46] tools_4.0.0 bit64_0.9-7 BSgenome_1.55.3
[49] glue_1.3.2 purrr_0.3.3 hms_0.5.3
[52] AnnotationDbi_1.49.1 memoise_1.1.0 knitr_1.28
[55] VariantAnnotation_1.33.0
>
after example(GenomicFiles)