From d94364b5ff8dd8787afb5bdbf91eaa75edfaec53 Mon Sep 17 00:00:00 2001 From: "Bridget Hass (US)" Date: Thu, 3 Sep 2026 17:02:46 -0600 Subject: [PATCH 1/3] add path to download my_shapes zip folder --- prismatic_workshop.ipynb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/prismatic_workshop.ipynb b/prismatic_workshop.ipynb index aa60257..9c2b635 100644 --- a/prismatic_workshop.ipynb +++ b/prismatic_workshop.ipynb @@ -121,7 +121,7 @@ "\n", "### Download shapefiles\n", "\n", - "The workflow also relies on manually derived crown-delineation shapefiles (`my_shapes.zip`), which are not downloaded automatically from NEON. These files can be downloaded from: `[PLACEHOLDER: add the location/link where my_shapes.zip is hosted]`.\n", + "The workflow also relies on manually derived crown-delineation shapefiles (`my_shapes.zip`), which are not downloaded automatically from NEON. These files can be downloaded `[here](https://storage.googleapis.com/neon-tutorial-datasets/prismatic/my_shapes.zip)`.\n", "\n", "The workshop's CyVerse environment already has these shapefiles staged, so participants do not need to download or move them. If you are **not** running in CyVerse, you will need to manually download `my_shapes.zip`, unzip it, and move the contents to the expected folder so the shapefile is found at `${TUTORIAL_HOME}/data/raw/inventory/manually_uploaded///my_shapes.shp` (for example, `data/raw/inventory/manually_uploaded/TEAK/2021/my_shapes.shp`).\n", "\n", From b65043f1909e272421102ab10e471cb269458200 Mon Sep 17 00:00:00 2001 From: "Bridget Hass (US)" Date: Thu, 3 Sep 2026 17:06:33 -0600 Subject: [PATCH 2/3] fix link to my_shapes.zip --- prismatic_workshop.ipynb | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/prismatic_workshop.ipynb b/prismatic_workshop.ipynb index a566221..90ca5eb 100644 --- a/prismatic_workshop.ipynb +++ b/prismatic_workshop.ipynb @@ -5,7 +5,7 @@ "id": "1c6b7bac", "metadata": {}, "source": [ - "---\n", + "---\n", "# PRISMATIC Workshop: Initializing FATES from NEON Remote Sensing\n", "\n", "## Tutorial Overview\n", @@ -49,12 +49,12 @@ "\n", "The PRISMATIC strategy is therefore a supervised, observation-to-model workflow. It uses field measurements to define and calibrate plant functional type classification and forest structure.\n", "\n", - "Keep this question in mind throughout the notebook: **What ecological information is being measured directly, what is being estimated, and how is uncertainty introduced at each handoff?**", + "Keep this question in mind throughout the notebook: **What ecological information is being measured directly, what is being estimated, and how is uncertainty introduced at each handoff?**\n", "\n", "For additional project motivation and context, see the workshop background presentation: https://canva.link/0e9gdg4lr18gdu9\n" ] }, - { + { "cell_type": "markdown", "id": "5e9f2c57-55b3-4b2b-b94b-7b1d9465e56c", "metadata": {}, @@ -104,7 +104,7 @@ "\n", "### Download shapefiles\n", "\n", - "The workflow also relies on manually derived crown-delineation shapefiles (`my_shapes.zip`), which are not downloaded automatically from NEON. These files can be downloaded `[here](https://storage.googleapis.com/neon-tutorial-datasets/prismatic/my_shapes.zip)`.\n", + "The workflow also relies on manually derived crown-delineation shapefiles (`my_shapes.zip`), which are not downloaded automatically from NEON. These files can be downloaded [here](https://storage.googleapis.com/neon-tutorial-datasets/prismatic/my_shapes.zip).\n", "\n", "The workshop's CyVerse environment already has these shapefiles staged, so participants do not need to download or move them. If you are **not** running in CyVerse, you will need to manually download `my_shapes.zip`, unzip it, and move the contents to the expected folder so the shapefile is found at `${TUTORIAL_HOME}/data/raw/inventory/manually_uploaded///my_shapes.shp` (for example, `data/raw/inventory/manually_uploaded/TEAK/2021/my_shapes.shp`).\n", "\n", From a47f9005dc4fc1f8bf340356a1ed528627d879eb Mon Sep 17 00:00:00 2001 From: "Bridget Hass (US)" Date: Thu, 3 Sep 2026 17:09:49 -0600 Subject: [PATCH 3/3] make it so that link automatically opens a new tab so download works --- prismatic_workshop.ipynb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/prismatic_workshop.ipynb b/prismatic_workshop.ipynb index 90ca5eb..22b2981 100644 --- a/prismatic_workshop.ipynb +++ b/prismatic_workshop.ipynb @@ -104,7 +104,7 @@ "\n", "### Download shapefiles\n", "\n", - "The workflow also relies on manually derived crown-delineation shapefiles (`my_shapes.zip`), which are not downloaded automatically from NEON. These files can be downloaded [here](https://storage.googleapis.com/neon-tutorial-datasets/prismatic/my_shapes.zip).\n", + "The workflow also relies on manually derived crown-delineation shapefiles (`my_shapes.zip`), which are not downloaded automatically from NEON. These files can be downloaded here.\n", "\n", "The workshop's CyVerse environment already has these shapefiles staged, so participants do not need to download or move them. If you are **not** running in CyVerse, you will need to manually download `my_shapes.zip`, unzip it, and move the contents to the expected folder so the shapefile is found at `${TUTORIAL_HOME}/data/raw/inventory/manually_uploaded///my_shapes.shp` (for example, `data/raw/inventory/manually_uploaded/TEAK/2021/my_shapes.shp`).\n", "\n",