PhysicsPaper/.gitignore at PythonADCD · apiprdt/PhysicsPaper · GitHub

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# =============================================================================
# ADCD — .gitignore
# Keep the repository clean for public / anonymous workshop submission.
# =============================================================================

# ── Python bytecode & caches ─────────────────────────────────────────────────
__pycache__/
*.py[cod]
*$py.class
*.pyo
.pytest_cache/

# ── Virtual environments ──────────────────────────────────────────────────────
.venv/
venv/
env/
ENV/
.env
.env.local

# ── Package build artefacts ───────────────────────────────────────────────────
*.egg-info/
dist/
build/
*.egg
*.whl

# ── LaTeX auxiliary files ─────────────────────────────────────────────────────
paper/*.aux
paper/*.log
paper/*.out
paper/*.toc
paper/*.synctex.gz
paper/*.fls
paper/*.fdb_latexmk
paper/*.blg
paper/*.run.xml
paper/**/*.aux
paper/**/*.log
paper/**/*.out
paper/**/*.toc
paper/**/*.synctex.gz
paper/**/*.fls
paper/**/*.fdb_latexmk
paper/**/*.blg
paper/**/*.run.xml
# Keep .bbl (needed by Overleaf / arXiv without bibtex run)
# paper/*.bbl  ← intentionally NOT ignored

# ── Submission / archive bundles ──────────────────────────────────────────────
*.zip
*.tar
*.tar.gz
overleaf_submission.zip

# ── Log and debug files ───────────────────────────────────────────────────────
*.log
adcd_validation_debug.log
src/adcd/adcd_validation_debug.log

# ── Local code dump (allcode.txt regenerated on demand) ───────────────────────
allcode.txt

# ── Intermediate / one-off JSON results (root-level) ─────────────────────────
experiment_results.json
ablation_results.json
blind_benchmark_results.json
correction_scaling_results.json
binary_pulsar_sensitivity.json
hybrid_seed42_results.json
misspecification_results.json
mlp_baseline_results.json
multivariable_benchmark_results.json
oracle_ablation_results.json
pysr_baseline_results.json
pysr_baseline_fair.json
pysr_baseline_generous.json
real_data_results.json
reproducibility_results.json
multi_seed_summary.json
timing_results.json
gate_telemetry.json
ras_fase0_results.json
adcd_v3_*_validation_report.json

# ── Scratch / temporary files ─────────────────────────────────────────────────
scratch/
scratch_*
scratch_canary_*.py
*.tmp
baseline_pre_fix.json

# ── Local helper / one-off scripts (not part of paper) ───────────────────────
benchmark_optimizer.py
generate_extended_figures.py
generate_figures.py
pysr_profiles.py

# ── Documentation build output ────────────────────────────────────────────────
site/
docs/
mkdocs.yml

# ── IDE / agent state ─────────────────────────────────────────────────────────
.zcode/
.vscode/
.idea/

# ── Windows artefacts ─────────────────────────────────────────────────────────
nul
Thumbs.db
desktop.ini

# ── Internal planning / strategy notes (not for public repo) ─────────────────
ARXIV_ENDORSERS_AND_SUBMISSION.md
PAPER_POSITIONING_STRATEGY.md
ADCD_Upgrade_Plan.md
ADCD_Upgrade_Plan_v2.md
ADCD_Writing_Humanization_Plan.md
ADCD_Master_Learning_Guide.md
RESTORE_IDENTITY.md

# ── Release / Zenodo drafts (local only) ─────────────────────────────────────
zenodo_v*.md
release_v*.md
RELEASE_NOTES*.md
CHANGELOG.md
CONTRIBUTING.md
CODE_OF_CONDUCT.md

# ── Translation / study files (local learning only) ──────────────────────────
indo/

# ── Release build directory ───────────────────────────────────────────────────
release/
results/
outputs/

# Local outputs and logs
adcd_validation_debug.log
allcode.txt
overleaf_submission.zip
.gemini/
scratch/
run_outputs/