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“venv” enviroment manager steals environment managed by other managers #1491

@flying-sheep

Description

@flying-sheep

related but not the same as #1471

Environment data

  • Python Environments extension version: 1.28.0
  • Python extension (ms-python.python) version: 2026.4.0
  • VS Code version (Help → About): 1.117.0
  • OS and version: irrelevant
  • Python version (& distribution if applicable, e.g. Anaconda): 3.14
  • Environment manager in use (venv / conda / pyenv / poetry / pipenv / system / uv / other): hatch
  • Shell (bash / zsh / fish / pwsh / cmd / other): irrelevant
  • Remote / container scenario (none / WSL / SSH Remote / Dev Container / Codespaces): none
  • Workspace type (single folder / multi-root / mono-repo): single folder
  • Is this a regression? If yes, last known working extension version: no

Repro Steps

  1. Install hatch environment extension from VSIX: https://github.com/flying-sheep/hatch-code/releases/tag/v0.1.1
  2. open a project and a python file
  3. select a hatch environment using the python-environments extension, e.g. default
  4. run the python.setInterpreter command and look at the offered venvs

the reason I need to use that command is #1485, i.e. ruff and ty don’t see the environment selected for the workspace, so I need top set both workspace and global environment separately. Really bad UX, please help how to fix that!

Expected behavior

the currently selected enviroment is listed as an environment provided by the hatch env manager

Actual behavior

the currently selected environment is listed as provided by the “venv” env manager

Logs

After selecting the hatch-test.py3.14-stable environment for the workspace, I cleared the logs, then ran the python.setInterpreter command. These are the logs generated by that action:

2026-04-28 09:47:39.248 [info] Refreshing Pyenv Environments
2026-04-28 09:47:39.248 [info] Refreshing pyenv environments
2026-04-28 09:47:39.248 [info] Refreshing Pipenv Environments
2026-04-28 09:47:39.248 [info] Refreshing pipenv environments
2026-04-28 09:47:39.248 [info] Refreshing Poetry Environments
2026-04-28 09:47:39.248 [info] Refreshing poetry environments
2026-04-28 09:47:39.248 [info] Refreshing Conda Environments
2026-04-28 09:47:39.248 [info] Refreshing conda environments (hardRefresh=true)
2026-04-28 09:47:39.265 [info] Discovered manager: (Poetry) /usr/bin/poetry
2026-04-28 09:47:39.266 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.14.0-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.266 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.12.12-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.266 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.9.25-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.267 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.15.0a3-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.267 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.8.20-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.267 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.11.14-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.267 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.10.19-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.267 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.13.11-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.425 [error] [pet] �[2m1972.690023812s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/anndata", trying slower approach
�[2m1972.690055081s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.11", trying slower approach

2026-04-28 09:47:39.425 [error] [pet] �[2m1972.690180269s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.12", trying slower approach
�[2m1972.690319097s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/scanpy-dev", trying slower approach

2026-04-28 09:47:39.426 [error] [pet] �[2m1972.691637659s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", trying slower approach

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.691887986s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test", executable: Some("/home/phil/.conda/envs/test/bin/python"), version: Some("3.12.7"), conda_dir: None, arch: None }

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.692087923s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/pynndescent", executable: Some("/home/phil/.conda/envs/pynndescent/bin/python"), version: Some("3.11.11"), conda_dir: None, arch: None }

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.692170232s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test-flit", executable: Some("/home/phil/.conda/envs/test-flit/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.692243541s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/scanpy-dev", executable: Some("/home/phil/.conda/envs/scanpy-dev/bin/python"), version: Some("3.12.2"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.692363709s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.11", executable: Some("/home/phil/.conda/envs/dask3.11/bin/python"), version: Some("3.11.13"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.692668645s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/anndata", executable: Some("/home/phil/.conda/envs/anndata/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:39.427 [error] [pet] �[2m1972.692715564s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.12", executable: Some("/home/phil/.conda/envs/dask3.12/bin/python"), version: Some("3.12.11"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:39.428 [info] Discovered env: /home/phil/.conda/envs/test/bin/python
2026-04-28 09:47:39.429 [info] Discovered env: /home/phil/.conda/envs/dask3.11/bin/python
2026-04-28 09:47:39.429 [info] Discovered env: /home/phil/.conda/envs/pynndescent/bin/python
2026-04-28 09:47:39.429 [error] [pet] �[2m1972.694182044s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", executable: Some("/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python"), version: Some("3.11.14"), conda_dir: None, arch: None }

2026-04-28 09:47:39.429 [info] Discovered env: /home/phil/.conda/envs/test-flit/bin/python
2026-04-28 09:47:39.429 [info] Discovered env: /home/phil/.conda/envs/dask3.12/bin/python
2026-04-28 09:47:39.429 [info] Discovered env: /home/phil/.conda/envs/scanpy-dev/bin/python
2026-04-28 09:47:39.430 [info] Discovered env: /home/phil/.conda/envs/anndata/bin/python
2026-04-28 09:47:39.430 [info] Discovered env: /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python
2026-04-28 09:47:39.434 [info] Discovered env: /bin/python
2026-04-28 09:47:39.543 [info] [pet] Telemetry:  {"event":"RefreshPerformance","data":{"refreshPerformance":{"total":216,"breakdown":{"GlobalVirtualEnvs":0,"Locators":173,"Path":216,"Workspaces":3},"locators":{"Conda":169,"Homebrew":0,"LinuxGlobal":172,"PipEnv":0,"Pixi":0,"Poetry":4,"PyEnv":0,"Uv":7,"Venv":0,"VirtualEnv":0,"VirtualEnvWrapper":0}}}}
2026-04-28 09:47:39.552 [info] Discovered manager: (Poetry) /usr/bin/poetry
2026-04-28 09:47:39.563 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.14.0-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.563 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.12.12-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.563 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.9.25-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.564 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.15.0a3-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.564 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.8.20-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.564 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.11.14-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.564 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.10.19-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.564 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.13.11-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.675 [info] Resolved Python Environment /bin/python
2026-04-28 09:47:39.717 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.734 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.750 [info] Discovered env: /bin/python
2026-04-28 09:47:39.750 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.755 [error] [pet] �[2m1973.020105145s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/anndata", trying slower approach

2026-04-28 09:47:39.755 [error] [pet] �[2m1973.020219993s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.12", trying slower approach
�[2m1973.020311612s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.11", trying slower approach

2026-04-28 09:47:39.756 [error] [pet] �[2m1973.020979753s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/scanpy-dev", trying slower approach

2026-04-28 09:47:39.756 [error] [pet] �[2m1973.021542445s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", trying slower approach

2026-04-28 09:47:39.757 [error] [pet] �[2m1973.021934849s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/pynndescent", executable: Some("/home/phil/.conda/envs/pynndescent/bin/python"), version: Some("3.11.11"), conda_dir: None, arch: None }

2026-04-28 09:47:39.758 [error] [pet] �[2m1973.022465312s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test", executable: Some("/home/phil/.conda/envs/test/bin/python"), version: Some("3.12.7"), conda_dir: None, arch: None }
�[2m1973.022622190s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test-flit", executable: Some("/home/phil/.conda/envs/test-flit/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }
�[2m1973.022749298s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.12", executable: Some("/home/phil/.conda/envs/dask3.12/bin/python"), version: Some("3.12.11"), conda_dir: None, arch: Some(X64) }
�[2m1973.022822557s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/scanpy-dev", executable: Some("/home/phil/.conda/envs/scanpy-dev/bin/python"), version: Some("3.12.2"), conda_dir: None, arch: Some(X64) }
�[2m1973.022926156s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.11", executable: Some("/home/phil/.conda/envs/dask3.11/bin/python"), version: Some("3.11.13"), conda_dir: None, arch: Some(X64) }
�[2m1973.023002075s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/anndata", executable: Some("/home/phil/.conda/envs/anndata/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }
�[2m1973.023468598s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", executable: Some("/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python"), version: Some("3.11.14"), conda_dir: None, arch: None }

2026-04-28 09:47:39.758 [info] Discovered env: /home/phil/.conda/envs/pynndescent/bin/python
2026-04-28 09:47:39.759 [info] Discovered env: /home/phil/.conda/envs/test/bin/python
2026-04-28 09:47:39.759 [info] Discovered env: /home/phil/.conda/envs/test-flit/bin/python
2026-04-28 09:47:39.760 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.762 [info] Discovered env: /home/phil/.conda/envs/dask3.11/bin/python
2026-04-28 09:47:39.762 [info] Discovered env: /home/phil/.conda/envs/dask3.12/bin/python
2026-04-28 09:47:39.763 [info] Discovered env: /home/phil/.conda/envs/scanpy-dev/bin/python
2026-04-28 09:47:39.763 [info] Discovered env: /home/phil/.conda/envs/anndata/bin/python
2026-04-28 09:47:39.763 [info] Discovered env: /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python
2026-04-28 09:47:39.792 [info] [pet] Telemetry:  {"event":"RefreshPerformance","data":{"refreshPerformance":{"total":248,"breakdown":{"GlobalVirtualEnvs":1,"Locators":216,"Path":248,"Workspaces":6},"locators":{"Conda":216,"Homebrew":0,"LinuxGlobal":203,"PipEnv":1,"Pixi":0,"Poetry":7,"PyEnv":0,"Uv":13,"Venv":0,"VirtualEnv":0,"VirtualEnvWrapper":0}}}}
2026-04-28 09:47:39.793 [info] Found venv environment: cpython-3.14.0-linux-x86_64-gnu (3.14.0)
2026-04-28 09:47:39.794 [info] Found venv environment: cpython-3.12.12-linux-x86_64-gnu (3.12.12)
2026-04-28 09:47:39.794 [info] Found venv environment: cpython-3.9.25-linux-x86_64-gnu (3.9.25)
2026-04-28 09:47:39.794 [info] Found venv environment: cpython-3.15.0a3-linux-x86_64-gnu (3.15.0)
2026-04-28 09:47:39.795 [info] Found venv environment: cpython-3.8.20-linux-x86_64-gnu (3.8.20)
2026-04-28 09:47:39.795 [info] Found venv environment: cpython-3.11.14-linux-x86_64-gnu (3.11.14)
2026-04-28 09:47:39.796 [info] Found venv environment: cpython-3.10.19-linux-x86_64-gnu (3.10.19)
2026-04-28 09:47:39.796 [info] Found venv environment: cpython-3.13.11-linux-x86_64-gnu (3.13.11)
2026-04-28 09:47:39.804 [info] Discovered manager: (Poetry) /usr/bin/poetry
2026-04-28 09:47:39.804 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.14.0-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.804 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.12.12-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.806 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.9.25-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.807 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.15.0a3-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.810 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.8.20-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.811 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.11.14-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.812 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.10.19-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.812 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.13.11-linux-x86_64-gnu/bin/python
2026-04-28 09:47:39.831 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.916 [info] Running in background: "/home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python" -m pytest -p vscode_pytest --collect-only -vv --color=yes --rootdir=/home/phil/Dev/Python/scverse/scverse-misc
2026-04-28 09:47:39.950 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.951 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.952 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.953 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.953 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.954 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.954 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.955 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.956 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:39.997 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.000 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.001 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.001 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.003 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.004 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.007 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.008 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.008 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.042 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.044 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.048 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.048 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.050 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.051 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.052 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.055 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.056 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.081 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.082 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.086 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.088 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.089 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.089 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.090 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.090 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.092 [info] Resolved Python Environment /home/phil/.local/share/hatch/env/virtual/scverse-misc/-r9DwIH4/hatch-test.py3.14-stable/bin/python
2026-04-28 09:47:40.095 [error] [pet] �[2m1973.360252442s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/anndata", trying slower approach
�[2m1973.360306071s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.12", trying slower approach

2026-04-28 09:47:40.097 [error] [pet] �[2m1973.360380610s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.11", trying slower approach
�[2m1973.360570667s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/scanpy-dev", trying slower approach
�[2m1973.361338677s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", trying slower approach

2026-04-28 09:47:40.097 [error] [pet] �[2m1973.362154876s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/pynndescent", executable: Some("/home/phil/.conda/envs/pynndescent/bin/python"), version: Some("3.11.11"), conda_dir: None, arch: None }

2026-04-28 09:47:40.097 [error] [pet] �[2m1973.362370883s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test", executable: Some("/home/phil/.conda/envs/test/bin/python"), version: Some("3.12.7"), conda_dir: None, arch: None }
�[2m1973.362443222s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/anndata", executable: Some("/home/phil/.conda/envs/anndata/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.097 [error] [pet] �[2m1973.362524130s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.12", executable: Some("/home/phil/.conda/envs/dask3.12/bin/python"), version: Some("3.12.11"), conda_dir: None, arch: Some(X64) }
�[2m1973.362599919s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test-flit", executable: Some("/home/phil/.conda/envs/test-flit/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.098 [error] [pet] �[2m1973.362682218s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/scanpy-dev", executable: Some("/home/phil/.conda/envs/scanpy-dev/bin/python"), version: Some("3.12.2"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.098 [error] [pet] �[2m1973.363383379s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", executable: Some("/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python"), version: Some("3.11.14"), conda_dir: None, arch: None }

2026-04-28 09:47:40.098 [info] Discovered env: /home/phil/.conda/envs/pynndescent/bin/python
2026-04-28 09:47:40.099 [info] Discovered env: /home/phil/.conda/envs/test/bin/python
2026-04-28 09:47:40.099 [info] Discovered env: /home/phil/.conda/envs/dask3.12/bin/python
2026-04-28 09:47:40.099 [error] [pet] �[2m1973.364306026s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.11", executable: Some("/home/phil/.conda/envs/dask3.11/bin/python"), version: Some("3.11.13"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.099 [info] Discovered env: /home/phil/.conda/envs/test-flit/bin/python
2026-04-28 09:47:40.099 [info] Discovered env: /home/phil/.conda/envs/anndata/bin/python
2026-04-28 09:47:40.100 [info] Discovered env: /home/phil/.conda/envs/scanpy-dev/bin/python
2026-04-28 09:47:40.100 [info] Discovered env: /home/phil/.conda/envs/dask3.11/bin/python
2026-04-28 09:47:40.100 [info] Discovered env: /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python
2026-04-28 09:47:40.104 [info] Discovered env: /bin/python
2026-04-28 09:47:40.133 [info] [pet] Telemetry:  {"event":"RefreshPerformance","data":{"refreshPerformance":{"total":339,"breakdown":{"GlobalVirtualEnvs":1,"Locators":310,"Path":338,"Workspaces":5},"locators":{"Conda":307,"Homebrew":0,"LinuxGlobal":309,"PipEnv":0,"Pixi":0,"Poetry":5,"PyEnv":0,"Uv":10,"Venv":0,"VirtualEnv":0,"VirtualEnvWrapper":0}}}}
2026-04-28 09:47:40.139 [info] Discovered manager: (Poetry) /usr/bin/poetry
2026-04-28 09:47:40.141 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.14.0-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.141 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.12.12-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.142 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.9.25-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.142 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.15.0a3-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.142 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.8.20-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.142 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.11.14-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.142 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.10.19-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.142 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.13.11-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.297 [error] [pet] �[2m1973.562576490s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/anndata", trying slower approach
�[2m1973.562588720s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.12", trying slower approach
�[2m1973.562576640s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.11", trying slower approach

2026-04-28 09:47:40.298 [error] [pet] �[2m1973.562896966s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/scanpy-dev", trying slower approach
�[2m1973.563498437s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", trying slower approach

2026-04-28 09:47:40.299 [error] [pet] �[2m1973.564347775s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.12", executable: Some("/home/phil/.conda/envs/dask3.12/bin/python"), version: Some("3.12.11"), conda_dir: None, arch: Some(X64) }
�[2m1973.564549693s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/pynndescent", executable: Some("/home/phil/.conda/envs/pynndescent/bin/python"), version: Some("3.11.11"), conda_dir: None, arch: None }

2026-04-28 09:47:40.300 [error] [pet] �[2m1973.564638541s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test", executable: Some("/home/phil/.conda/envs/test/bin/python"), version: Some("3.12.7"), conda_dir: None, arch: None }
�[2m1973.564715150s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/anndata", executable: Some("/home/phil/.conda/envs/anndata/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }
�[2m1973.564904808s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/scanpy-dev", executable: Some("/home/phil/.conda/envs/scanpy-dev/bin/python"), version: Some("3.12.2"), conda_dir: None, arch: Some(X64) }
�[2m1973.564809029s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test-flit", executable: Some("/home/phil/.conda/envs/test-flit/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }
�[2m1973.564986337s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.11", executable: Some("/home/phil/.conda/envs/dask3.11/bin/python"), version: Some("3.11.13"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.300 [info] Discovered env: /bin/python
2026-04-28 09:47:40.300 [error] [pet] �[2m1973.565156244s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", executable: Some("/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python"), version: Some("3.11.14"), conda_dir: None, arch: None }

2026-04-28 09:47:40.300 [info] Discovered env: /home/phil/.conda/envs/dask3.12/bin/python
2026-04-28 09:47:40.300 [info] Discovered env: /home/phil/.conda/envs/pynndescent/bin/python
2026-04-28 09:47:40.302 [info] Discovered env: /home/phil/.conda/envs/dask3.11/bin/python
2026-04-28 09:47:40.303 [info] Discovered env: /home/phil/.conda/envs/test/bin/python
2026-04-28 09:47:40.303 [info] Discovered env: /home/phil/.conda/envs/anndata/bin/python
2026-04-28 09:47:40.303 [info] Discovered env: /home/phil/.conda/envs/test-flit/bin/python
2026-04-28 09:47:40.303 [info] Discovered env: /home/phil/.conda/envs/scanpy-dev/bin/python
2026-04-28 09:47:40.303 [info] Discovered env: /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python
2026-04-28 09:47:40.333 [info] [pet] Telemetry:  {"event":"RefreshPerformance","data":{"refreshPerformance":{"total":198,"breakdown":{"GlobalVirtualEnvs":0,"Locators":167,"Path":198,"Workspaces":3},"locators":{"Conda":167,"Homebrew":0,"LinuxGlobal":164,"PipEnv":0,"Pixi":0,"Poetry":4,"PyEnv":0,"Uv":7,"Venv":0,"VirtualEnv":0,"VirtualEnvWrapper":0}}}}
2026-04-28 09:47:40.334 [info] Pipenv not found via settings, cache, or PATH
2026-04-28 09:47:40.334 [info] Found 0 pipenv environments
2026-04-28 09:47:40.340 [info] Discovered manager: (Poetry) /usr/bin/poetry
2026-04-28 09:47:40.341 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.14.0-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.341 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.12.12-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.341 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.9.25-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.341 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.15.0a3-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.342 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.8.20-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.342 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.11.14-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.342 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.10.19-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.342 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.13.11-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.503 [error] [pet] �[2m1973.768240212s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/anndata", trying slower approach
�[2m1973.768278332s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.11", trying slower approach
�[2m1973.768290591s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.12", trying slower approach
�[2m1973.768639767s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/scanpy-dev", trying slower approach

2026-04-28 09:47:40.504 [error] [pet] �[2m1973.769246088s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", trying slower approach

2026-04-28 09:47:40.505 [error] [pet] �[2m1973.769770391s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/pynndescent", executable: Some("/home/phil/.conda/envs/pynndescent/bin/python"), version: Some("3.11.11"), conda_dir: None, arch: None }

2026-04-28 09:47:40.505 [error] [pet] �[2m1973.770219525s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.12", executable: Some("/home/phil/.conda/envs/dask3.12/bin/python"), version: Some("3.12.11"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.505 [error] [pet] �[2m1973.770457002s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test", executable: Some("/home/phil/.conda/envs/test/bin/python"), version: Some("3.12.7"), conda_dir: None, arch: None }
�[2m1973.770594840s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test-flit", executable: Some("/home/phil/.conda/envs/test-flit/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }
�[2m1973.770684238s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.11", executable: Some("/home/phil/.conda/envs/dask3.11/bin/python"), version: Some("3.11.13"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.505 [info] Discovered env: /home/phil/.conda/envs/pynndescent/bin/python
2026-04-28 09:47:40.506 [error] [pet] �[2m1973.770784797s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/anndata", executable: Some("/home/phil/.conda/envs/anndata/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }
�[2m1973.770869886s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/scanpy-dev", executable: Some("/home/phil/.conda/envs/scanpy-dev/bin/python"), version: Some("3.12.2"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.506 [info] Discovered env: /home/phil/.conda/envs/dask3.12/bin/python
2026-04-28 09:47:40.506 [info] Discovered env: /home/phil/.conda/envs/test/bin/python
2026-04-28 09:47:40.506 [info] Discovered env: /home/phil/.conda/envs/dask3.11/bin/python
2026-04-28 09:47:40.509 [error] [pet] �[2m1973.773038296s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", executable: Some("/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python"), version: Some("3.11.14"), conda_dir: None, arch: None }

2026-04-28 09:47:40.509 [info] Discovered env: /home/phil/.conda/envs/test-flit/bin/python
2026-04-28 09:47:40.509 [info] Discovered env: /home/phil/.conda/envs/scanpy-dev/bin/python
2026-04-28 09:47:40.509 [info] Discovered env: /home/phil/.conda/envs/anndata/bin/python
2026-04-28 09:47:40.511 [info] Discovered env: /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python
2026-04-28 09:47:40.514 [info] Discovered env: /bin/python
2026-04-28 09:47:40.560 [info] [pet] Telemetry:  {"event":"RefreshPerformance","data":{"refreshPerformance":{"total":223,"breakdown":{"GlobalVirtualEnvs":0,"Locators":180,"Path":223,"Workspaces":4},"locators":{"Conda":176,"Homebrew":0,"LinuxGlobal":179,"PipEnv":0,"Pixi":0,"Poetry":6,"PyEnv":0,"Uv":10,"Venv":0,"VirtualEnv":0,"VirtualEnvWrapper":0}}}}
2026-04-28 09:47:40.565 [info] Discovered manager: (Poetry) /usr/bin/poetry
2026-04-28 09:47:40.566 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.14.0-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.566 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.12.12-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.566 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.9.25-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.566 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.15.0a3-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.566 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.8.20-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.567 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.11.14-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.567 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.10.19-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.567 [info] Discovered env: /home/phil/.local/share/uv/python/cpython-3.13.11-linux-x86_64-gnu/bin/python
2026-04-28 09:47:40.737 [error] [pet] �[2m1974.002044846s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.11", trying slower approach
�[2m1974.002054116s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/anndata", trying slower approach
�[2m1974.002071006s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/dask3.12", trying slower approach

2026-04-28 09:47:40.737 [error] [pet] �[2m1974.002379551s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/.conda/envs/scanpy-dev", trying slower approach

2026-04-28 09:47:40.738 [error] [pet] �[2m1974.003065202s�[0m �[33m WARN�[0m �[2mpet_conda::package�[0m�[2m:�[0m Unable to find conda package Python in "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", trying slower approach

2026-04-28 09:47:40.738 [error] [pet] �[2m1974.003609544s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/pynndescent", executable: Some("/home/phil/.conda/envs/pynndescent/bin/python"), version: Some("3.11.11"), conda_dir: None, arch: None }

2026-04-28 09:47:40.739 [error] [pet] �[2m1974.003933300s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test", executable: Some("/home/phil/.conda/envs/test/bin/python"), version: Some("3.12.7"), conda_dir: None, arch: None }

2026-04-28 09:47:40.739 [error] [pet] �[2m1974.004166017s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.12", executable: Some("/home/phil/.conda/envs/dask3.12/bin/python"), version: Some("3.12.11"), conda_dir: None, arch: Some(X64) }
�[2m1974.004229076s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/test-flit", executable: Some("/home/phil/.conda/envs/test-flit/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.739 [error] [pet] �[2m1974.004390814s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/scanpy-dev", executable: Some("/home/phil/.conda/envs/scanpy-dev/bin/python"), version: Some("3.12.2"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.739 [error] [pet] �[2m1974.004540171s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/dask3.11", executable: Some("/home/phil/.conda/envs/dask3.11/bin/python"), version: Some("3.11.13"), conda_dir: None, arch: Some(X64) }
�[2m1974.004566251s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/.conda/envs/anndata", executable: Some("/home/phil/.conda/envs/anndata/bin/python"), version: Some("3.8.5"), conda_dir: None, arch: Some(X64) }

2026-04-28 09:47:40.740 [info] Discovered env: /home/phil/.conda/envs/pynndescent/bin/python
2026-04-28 09:47:40.740 [error] [pet] �[2m1974.005035855s�[0m �[31mERROR�[0m �[2mpet_conda�[0m�[2m:�[0m Unable to find Conda Manager for the Conda env: CondaEnvironment { prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv", executable: Some("/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python"), version: Some("3.11.14"), conda_dir: None, arch: None }

2026-04-28 09:47:40.740 [info] Discovered env: /home/phil/.conda/envs/test/bin/python
2026-04-28 09:47:40.740 [info] Discovered env: /home/phil/.conda/envs/dask3.12/bin/python
2026-04-28 09:47:40.743 [info] Discovered env: /home/phil/.conda/envs/test-flit/bin/python
2026-04-28 09:47:40.745 [info] Discovered env: /home/phil/.conda/envs/dask3.11/bin/python
2026-04-28 09:47:40.745 [info] Discovered env: /bin/python
2026-04-28 09:47:40.745 [info] Discovered env: /home/phil/.conda/envs/scanpy-dev/bin/python
2026-04-28 09:47:40.745 [info] Discovered env: /home/phil/.conda/envs/anndata/bin/python
2026-04-28 09:47:40.745 [info] Discovered env: /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv/bin/python
2026-04-28 09:47:40.774 [info] Using conda from cache: /usr/bin/conda
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "pynndescent"
    - Prefix: "/home/phil/.conda/envs/pynndescent"
    - Name: "pynndescent"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "test"
    - Prefix: "/home/phil/.conda/envs/test"
    - Name: "test"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "dask3.12"
    - Prefix: "/home/phil/.conda/envs/dask3.12"
    - Name: "dask3.12"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "test-flit"
    - Prefix: "/home/phil/.conda/envs/test-flit"
    - Name: "test-flit"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "dask3.11"
    - Prefix: "/home/phil/.conda/envs/dask3.11"
    - Name: "dask3.11"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "scanpy-dev"
    - Prefix: "/home/phil/.conda/envs/scanpy-dev"
    - Name: "scanpy-dev"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: "anndata"
    - Prefix: "/home/phil/.conda/envs/anndata"
    - Name: "anndata"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] === Conda Shell Activation Map Generation ===
Environment Configuration:
    - Identifier: ".venv"
    - Prefix: "/home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv"
    - Name: ".venv"

✓ Conda already active on launch, using default activation commands
==========================================
2026-04-28 09:47:40.775 [info] Found named environment: pynndescent at /home/phil/.conda/envs/pynndescent
2026-04-28 09:47:40.775 [info] Found named environment: test at /home/phil/.conda/envs/test
2026-04-28 09:47:40.775 [info] Found named environment: dask3.12 at /home/phil/.conda/envs/dask3.12
2026-04-28 09:47:40.775 [info] Found named environment: test-flit at /home/phil/.conda/envs/test-flit
2026-04-28 09:47:40.775 [info] Found named environment: dask3.11 at /home/phil/.conda/envs/dask3.11
2026-04-28 09:47:40.775 [info] Found named environment: scanpy-dev at /home/phil/.conda/envs/scanpy-dev
2026-04-28 09:47:40.775 [info] Found named environment: anndata at /home/phil/.conda/envs/anndata
2026-04-28 09:47:40.775 [info] Found named environment: .venv at /home/phil/Dev/Python/Jupyter/jupyterlab-deck/.venv
2026-04-28 09:47:40.859 [info] [pet] Telemetry:  {"event":"RefreshPerformance","data":{"refreshPerformance":{"total":213,"breakdown":{"GlobalVirtualEnvs":0,"Locators":181,"Path":213,"Workspaces":2},"locators":{"Conda":181,"Homebrew":0,"LinuxGlobal":179,"PipEnv":0,"Pixi":0,"Poetry":3,"PyEnv":0,"Uv":6,"Venv":0,"VirtualEnv":0,"VirtualEnvWrapper":0}}}}
2026-04-28 09:47:40.865 [error] Process exited with error code: 2, signal: null

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