From 6c5a96deeae37ea8c00d5d707f4e748a1cd3bd0d Mon Sep 17 00:00:00 2001 From: Jean-Marie Burel Date: Thu, 9 Jun 2022 10:44:08 +0100 Subject: [PATCH 1/4] rebuild --- .github/workflows/source_build.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.github/workflows/source_build.yml b/.github/workflows/source_build.yml index 4f97849a152..067f29d6ce5 100644 --- a/.github/workflows/source_build.yml +++ b/.github/workflows/source_build.yml @@ -18,3 +18,5 @@ jobs: flake8 . - name: Build run: ./build.py + - name: Rebuild + run: ./build.py clean && ./build.py From f9a10f35bd6ab8d4fcfcec3801cbcf6853f35e61 Mon Sep 17 00:00:00 2001 From: Jean-Marie Burel Date: Fri, 10 Jun 2022 10:41:43 +0100 Subject: [PATCH 2/4] check m2 --- .github/workflows/source_build.yml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/.github/workflows/source_build.yml b/.github/workflows/source_build.yml index 067f29d6ce5..2ae92b83996 100644 --- a/.github/workflows/source_build.yml +++ b/.github/workflows/source_build.yml @@ -18,5 +18,7 @@ jobs: flake8 . - name: Build run: ./build.py + - name: Check .m2 + run: ls -alR ${HOME}/.m2 - name: Rebuild run: ./build.py clean && ./build.py From 329303b0c10739ba00d092aebcd0a0f2ee2820b6 Mon Sep 17 00:00:00 2001 From: Jean-Marie Burel Date: Mon, 13 Jun 2022 17:37:03 +0100 Subject: [PATCH 3/4] build ZarrReader --- .github/workflows/source_build.yml | 19 +++++++++++++++++-- 1 file changed, 17 insertions(+), 2 deletions(-) diff --git a/.github/workflows/source_build.yml b/.github/workflows/source_build.yml index 2ae92b83996..71647f55b3b 100644 --- a/.github/workflows/source_build.yml +++ b/.github/workflows/source_build.yml @@ -12,13 +12,28 @@ jobs: steps: - uses: actions/checkout@v2 - uses: ome/action-ice@v1 + - name: Checkout repositories + run: | + cd .. + WORKSPACE=$(pwd) + echo "space="${WORKSPACE} >> $GITHUB_ENV + git clone -b dependency-updates https://github.com/jburel/ZarrReader + - name: Build ZarrReader + run: | + cd $space/ZarrReader + mvn install - name: Install and run flake8 run: | + cd $space/openmicroscopy pip install flake8 flake8 . - name: Build - run: ./build.py + run: | + cd $space/openmicroscopy + ./build.py - name: Check .m2 run: ls -alR ${HOME}/.m2 - name: Rebuild - run: ./build.py clean && ./build.py + run: | + cd $space/openmicroscopy + ./build.py clean && ./build.py From 4fb174b09ff0ebb0cd102ac3c4cbad160bfc2ce3 Mon Sep 17 00:00:00 2001 From: Jean-Marie Burel Date: Mon, 13 Jun 2022 17:37:32 +0100 Subject: [PATCH 4/4] use ZarrReader snapshot --- etc/omero.properties | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/etc/omero.properties b/etc/omero.properties index b0a06895f69..ed71ca7e8ec 100644 --- a/etc/omero.properties +++ b/etc/omero.properties @@ -212,6 +212,6 @@ versions.omero-blitz=5.5.10 versions.omero-common-test=5.5.9 versions.omero-gateway=5.6.9 versions.omero-scripts=5.6.2 -versions.OMEZarrReader=0.2.0 +versions.OMEZarrReader=0.2.1-SNAPSHOT ## Global overrides, if empty ignored versions.bioformats=