Skip to content

Integrate THOTH STEM workspace and Platinum-scoped proof kernels - #19

Merged
AnubisQuantumCipher merged 23 commits into
masterfrom
feat/platinum-thoth-integration
Aug 29, 2026
Merged

Integrate THOTH STEM workspace and Platinum-scoped proof kernels#19
AnubisQuantumCipher merged 23 commits into
masterfrom
feat/platinum-thoth-integration

Conversation

@AnubisQuantumCipher

@AnubisQuantumCipher AnubisQuantumCipher commented Aug 29, 2026

Copy link
Copy Markdown
Owner

Outcome

This adds THOTH as an integrated JACKAL subsystem, expands the Codex wrapper with linked STEM/CAS/graphing/measurement/aerospace surfaces, and introduces two narrowly scoped SPARK Platinum components. It preserves the sealed v1.7.3 runtime inventory and all existing JACKAL status, refusal, ceiling, and non-claim semantics.

Main changes

  • Integrated CAS, graphing, exact-field matrices, regression, sensor/provenance, aerospace models, linked views, and HELLGATE result routing.
  • Professional linked evidence workspace and HELLGATE graph assets; pixels remain explicitly non-evidentiary.
  • Static exact-rational HELLGATE certificate replay with a bounded E0 enclosure and explicit non-claims for unproved diagnostics.
  • SPARK interval decision kernel with full functional contracts over its declared finite fixed-point domain.
  • SPARK claim-policy algebra with exhaustive refinement vectors against both Python implementations.
  • Bidirectional machine-readable assurance traceability and a whole-product open-boundary gate.
  • Linux aarch64 development/runtime support with architecture-qualified compiler, Z3, proof-identity, and package identities.
  • Immutable v1.7.3 release manifest and capability inventory preserved byte-for-byte; additive Codex bytes have their own development-overlay identity.

Fresh local verification

  • Capability drift gate: PASS, exact published kernel surface retained.
  • Capability inventory and drift suites: 41 tests passed.
  • Complete Codex plugin suite: 304 tests passed, one expected skip because /bin/zsh is absent on this host.
  • Exact additive plugin identity: verified across 18 files.
  • HELLGATE SPARK interval kernel: all 55 reported checks proved.
  • Claim-policy SPARK kernel: all 18 reported checks proved.
  • Assurance traceability suite: PASS.
  • Anubis program-verifier suite: 15 tests passed.
  • Hermes bundle identity mechanism: repository/package equality, all declared runtime mutations bound, and post-start manifest/runtime swaps refused.
  • Spacecraft pure certificate suite: 122 tests passed.
  • Linked-workspace desktop and tablet UI acceptance: PASS.
  • Lean checkers build successfully from the pinned dependency graph; legacy linter warnings and accepted standard axioms remain visible rather than being relabeled warning-free.

Claim boundary

The Platinum claim is component-scoped only to the declared SPARK kernels and their allocated finite-domain requirements. It does not establish universal correctness of Python, QML, JavaScript, shell, Linux, compiler/runtime refinement, hardware, sensor authenticity, physical aerospace models, or the whole JACKAL product. HELLGATE E0 remains bounded, not formal-bounded; the certificate does not prove moments, perturbation derivatives, BdG stability, or all challenge parts.

The current Hermes source-tree selftest deliberately reports SKIPPED-manifest-pending for unreleased development bytes. Success-path tests assemble a self-consistent package-local manifest, while the published release manifest remains immutable. macOS-only spacecraft publication/package gates are left to their owning macOS workflow and are not weakened to pass on Linux.

sicarii and others added 18 commits August 23, 2026 21:28
Extends the JACKAL runtime and its Codex plugin to Linux aarch64 alongside
the existing macOS arm64 support, non-destructively — the macOS release
identity (MANIFEST.sha256, proof identities, compat floor) stays byte-clean
and every macOS code path falls through unchanged.

Re-pin (formal lanes on Linux):
- release/tools/repin_linux.py derives a per-host
  release/MANIFEST.<host>.sha256 that rebinds only the compiled-binary rows,
  the proof-identity rows, and the compiler pin from live bytes; all other
  rows are copied verbatim from the macOS manifest.
- Host-suffixed Linux proof identities, a Linux compat floor, and a Linux
  lean-admission-audit are generated from the locally built Lean checkers.
- release_validate.py, gaussian_release.py, int_cert_release.py,
  formal_receipt.py and lean_admission_audit.py prefer host-suffixed evidence
  and fall back to the pinned macOS records.
- The ten jackal-*-release wrappers select the per-host manifest and identity.
  All ten formal lanes emit status=formal-bounded with re-verified receipts.

Provisioner (install the Linux runtime):
- release/build_package_linux.sh builds jackal-v1.7.3-linux-aarch64.tar.gz,
  passing full identity + semantic validation (plugin identity_match, formal
  smokes, receipt replays). The atomic no-replace publish uses renameat2
  (RENAME_NOREPLACE) on Linux.
- provision_runtime.py: SUPPORTED_HOSTS + RELEASE_PINS gain linux-aarch64;
  resolve_host/release_pin/rename_exclusive_for_host select per host;
  provision() binds the host release pin; byte caps fit the largest runtime;
  a POSIX launch_mcp.sh joins launch_mcp.zsh with a byte-identical probe.
- mcp/server.py locator + package-metadata checks use effective_release_pins.
- A ubuntu-24.04-arm CI job runs the plugin gates on Linux.

Note: the domain-pack protocol-v1 verifier host-gates to macOS in pinned
shared source, so its staged QA is skipped for a local build
(JACKAL_LOCAL_BUILD=1); the ~4 domain-pack/program tools fail closed on
Linux, and the archival v1.7.0 lane stays macOS bytes. 37/41 tools work on
Linux, including every formal-bounded lane.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The domain-pack protocol-v1 verifier (tools/domain_pack_verify.py) hard-gated
to Darwin/arm64, so the four domain-pack/decision tools (jackal_decision_rank,
jackal_decision_rank_v2, jackal_test_exists, jackal_claim_cites_test) refused
on Linux with "requires Apple Silicon macOS". This admits Linux/aarch64 to
that verifier and propagates the resulting digest change consistently.

- domain_pack_verify.py: validate_host() gains a SUPPORTED_HOSTS set
  ({Darwin/arm64, Linux/aarch64}); the emitted report's host field now
  reflects the real host instead of a hardcoded "darwin-arm64". macOS behavior
  is unchanged.
- domain_packs/registry_v1.json: pack_verifier_sha256 rebound to the edited
  verifier, registry_digest_sha256 recomputed over the canonical body.
- The domain_pack_verifier + domain_pack_registry rows are updated in BOTH
  release/MANIFEST.sha256 and release/MANIFEST.linux-aarch64.sha256 (the
  verifier and registry are shared, platform-neutral source), and
  capability_inventory_v1.json + the plugin identity manifest are regenerated.
- build_package_linux.sh: the JACKAL_LOCAL_BUILD domain-pack QA skip is
  removed; the staged domain-pack verification now runs unconditionally and
  passes on Linux.
- provision_runtime.py: linux-aarch64 release pin updated for the rebuilt
  package (sha 15803b7e, 177404787 bytes).

Verified through the provisioner-installed runtime: all 41 tools are
host-clean — exact/checked/estimated/bounded/formal-bounded lanes compute,
decision_rank and test_exists return exact/structural-exact, and the
claim/verify/program tools reach real input validation with no host refusal.
The codex_plugin suite, drift gate, capability inventory, plugin identity, and
repin_linux --check all pass; the program-evidence verifier's 12/15 pass on
Linux matches pristine (the 3 failures are pre-existing shallow-clone
fixtures, not from this change).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The Linux package previously shipped one macOS binary — jackal_cert_check_v170,
the archival v1.7.0 range-replay checker, pulled from the Apple release archive.
It could not execute on Linux, so the archival replay lane was a dead file. This
rebuilds it native and re-pins the archival chain, so the Omarchy (Linux aarch64)
edition carries zero macOS bytes: all five binaries are native ELF.

- The v1.7.0 range checker is rebuilt from the v1.7.0 tag's Lean source against
  the same Lean 4.32 / Mathlib v4.32 toolchain (native ELF, sha d515cdc2). It
  ACCEPTs a valid enclosure and REJECTs a tampered one, verified in the
  installed runtime.
- A native archival v1 proof identity (schema jackal-range-proof-identity-v1,
  binding the native checker bytes) is generated at the v1.7.0 tag and shipped as
  release/evidence/range_proof_identity.linux-aarch64.json.
- Host-aware archival pins: formal_receipt.py resolves both the archival range
  checker sha and the archival identity file sha per host (native on Linux via
  release/evidence/archival_range_checker.linux-aarch64, macOS bytes as the
  fallback); the Linux compat floor and manifest carry the native shas;
  repin_linux.py rebinds the archival-range-checker and archival-range-proof
  rows.
- build_package_linux.sh no longer downloads the Apple v1.7.0 archive: it copies
  the native archival checker and the platform-neutral archival coverage
  inventory from JACKAL_ARCHIVAL_DIR, verifying both against their pins.

Verified: the built package and installed runtime contain zero Mach-O binaries;
full identity + semantic validation passes (including the archival identity /
checker consistency checks); plugin identity_match=true; all 41 tools and every
formal lane work. macOS release identity (MANIFEST.sha256, the macOS archival
identity, macOS compat floor) is untouched — the host-aware fallbacks keep the
macOS edition on its original bytes.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Adds ("Linux","x86_64") to SUPPORTED_HOSTS with a null RELEASE_PIN so the host
is recognized and provisioning refuses "no published release asset for host
linux-x86_64" until a native x86_64 package is built and OBSERVED on x86_64
hardware (planned bare-metal iMac Pro). No x86_64 function is claimed. The
aarch64/x86_64 arch-substitution refusal follows from the per-host pin/directory
binding. Plugin identity regenerated for the changed provisioner.

Part of the Omarchy JACKAL native-product mission: architecture gate for a
versioned Linux product with architecture-specific native artifacts, not an
aarch64-only fork.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
…ded sign-off)

Under the architect's 2026-08-23 bounded sign-off: admit a native Linux aarch64
Z3 4.15.4 as a separate architecture-qualified program-evidence trust anchor.
The guest's system Z3 4.16.0 is NOT admitted.

- Z3 4.15.4 pinned from official source (archive dae52625, tree 0e4123f4,
  version verified), independently double-built byte-identical (b6fcd93b) in two
  isolated directories under a recorded deterministic recipe; native aarch64 ELF,
  no dependency on the guest 4.16.0.
- tools/anubis_program_verify.py: host-aware _approved_z3_for_host() selects the
  Darwin anchor (preserved EXACTLY) or the Linux aarch64 anchor (b6fcd93b),
  enforcing exact digest + semver 4.15.4 + no-symlink + owner/mode +
  single-snapshot identity. The inventory-safe-v1 policy body is byte-frozen
  (POLICY_SHA256 1b94350a unchanged); no verification semantics, residual, or
  refusal is loosened.
- Negative controls verified: Linux 4.16.0 refused (z3-identity-mismatch),
  symlink/one-byte-tamper/world-writable refused, pristine restores (A->B->A).
- The approved Z3 is shipped in the package (jackal_z3_v4154) and pinned in the
  Linux manifest (approved-z3-linux-aarch64); build_package_linux.sh copies it
  from JACKAL_Z3_DIR; repin_linux appends the anchor row.
- jackal_anubis_verify_program + verify_program_receipt now PASS from the
  installed package with all six residuals open and the artifact never executed.

The shared verifier hash change updates the anubis_program_verifier row in both
manifests and the capability inventory (authorized; macOS proof/checker/floor and
the inventory-safe-v1 policy body remain byte-identical to baseline).

jackal_anubis_check_program remains BLOCKED on the SEPARATE approved-check-compiler
anchor, which this Z3 sign-off does not authorize.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
…4 stack

The Omarchy edition's binaries (anubis, jackal-native, Lean checkers, archival
checker, Z3 4.15.4, package) are all built from source and not committed. This
captures the complete reproduction recipe, known-good digests, and the pending
check-compiler trust-surface sign-off in one place so the stack is durable.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Resolve the check-compiler sign-off for jackal_anubis_check_program on
Linux/aarch64 via the architect's clean-source route, without reusing the
historical macOS anchor (0d6a8f89) and without weakening inventory-safe-v1.

- tools/anubis_program_verify.py: point the architecture-qualified check
  compiler anchor at the reproducible clean-source build
  7cdafb30... (supersedes the pre-emitter d8c7d38b...). macOS anchor,
  both Z3 anchors, host-aware selection, and the frozen inventory-safe-v1
  policy body (1b94350a...) are untouched.
- release/evidence/approved_check_compiler.linux-aarch64: pin marker.
- release/tools/repin_linux.py: append the approved-check-compiler-<host> row.
- release/build_package_linux.sh: ship the digest-checked check compiler and
  emit its manifest row.
- release/MANIFEST{,.linux-aarch64}.sha256: rebind the verifier row to
  cafbd257... and the linux check-compiler row to 7cdafb30...
- release/capability_inventory_v1.json: regenerate (verifier pin cafbd257...).
- plugins/jackel/scripts/provision_runtime.py + PLUGIN_IDENTITY.sha256:
  repin the self-consistent Linux package (0b239bc7...).

Verified end-to-end through the unmodified verifier and the real hermes
plugin on a clean-install runtime: verified-program-evidence, 4 obligations
independently RUP-replayed + approved-Z3-unsat; all negative controls fail
closed; 41/41 tools present; drift gate + plugin identity + 12/12 adversarial
A->B->A pass.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01KBajXqAr1zojERZGTTxY2n
…x/aarch64

The MCP server validated the installed runtime tree against the module-level
SHA256SUMS_SHA256 constant, which is the macOS release value. On Linux/aarch64
the runtime's SHA256SUMS is the host tree, so both startup checks refused
("pinned runtime validation refused", then "private runtime snapshot creation
refused") and the server never started.

Resolve it the same way the metadata check already resolves the package sha:
expose sha256sums_sha256 from effective_release_pins() (host-aware) and use it
in both server startup calls (validate_runtime + create_runtime_snapshot)
instead of the macOS module constant. macOS behaviour is unchanged — its host
pin equals the module constant.

Verified: `claude mcp list` -> jackal ✔ Connected; initialize + tools/list over
a persistent pipe returns all 41 tools; tools/call round-trips.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01KBajXqAr1zojERZGTTxY2n
…k compiler

Record the architect's sign-off designating the clean-source Linux/aarch64
Anubis check compiler (7cdafb30...) as the approved check compiler for
jackal_anubis_check_program on Linux/aarch64.

Unlike the historical macOS candidate (0d6a8f89, "caller-pinned candidate;
architect sign-off required", source irrecoverable), this is a committed
clean-source, reproducibly double-built (byte-identical), architecture-qualified
identity verified end-to-end through the unmodified frozen verifier and the real
plugin. Scope is Linux/aarch64 only: the macOS candidate is not reused and the
inventory-safe-v1 policy body stays byte-frozen (1b94350a). macOS and both Z3
anchors are untouched.

Standalone authority evidence (mirrors the macOS dogfood record; not
manifest-pinned).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01KBajXqAr1zojERZGTTxY2n
The architect sign-off for jackal_anubis_check_program on Linux/aarch64 was
granted+recorded 2026-08-24 (SIGNOFF_linux_aarch64.json, verifier anchor
7cdafb30, VERDICT.txt/STATUS.json=ARCHITECT_SIGNED_OFF) and independently
re-verified today (verified-program-evidence, 4 proofs, receipt 81d6477e).
The 'Pending trust-surface sign-offs' section was stale; mark it RESOLVED.
Product verdict stays _V111_PENDING (gated on the future sealed 49-tool
package, not this round). No verifier acceptance broadened; anchors untouched.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
… changes

Adversarial pre-push review (multi-agent) + emitter stress-test across the real
program space surfaced test/inventory drift from this cycle's host-aware and
re-pin changes. No production behaviour changes here; the signed-off check
compiler (7cdafb30) is untouched.

- release/capability_inventory_v1.json: regenerate to pick up the host-aware
  mcp/server.py sha (the drift gate + `capability_inventory --check` now pass).
- tests/codex_plugin/test_mcp_adapter.py: the two fake provisioners now expose
  sha256sums_sha256 from effective_release_pins(), matching the real host-aware
  contract the server startup path now uses (validate_runtime +
  create_runtime_snapshot). Fixes 4 errors + 1 failure.
- tests/codex_plugin/test_runtime_provisioner.py: update the host-guard tests to
  the actually-supported set (Darwin/arm64, Linux/aarch64, and the Linux/x86_64
  declared gate with a None pin), still refusing genuinely foreign hosts. The old
  "darwin-only" assertions predated the Linux host support already on this branch.
- tests/anubis_program_verifier_test.py: the dangling-out_root check test now
  patches the host-aware anchor helper (_approved_check_compiler_sha256_for_host)
  so it passes on Linux/aarch64, where the macOS constant is not consulted.

Verified: full tests/codex_plugin suite (235) green on Linux; capability
inventory --check + drift gate green; emitter stress-tested across 10 real
programs (0 canonical-id mismatches at up to 46 functions; every refusal a
legitimate fail-safe contract/budget boundary); emitter analysis output is
byte-deterministic (only the native artifact sha varies, a pre-existing codegen
property, faithfully recorded).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01KBajXqAr1zojERZGTTxY2n
… compiler 6c3ae920

Owner (khephri.labs@proton.me) authorized adopting the host-honesty fix into the
signed check compiler. Re-pins the SOURCE-OF-TRUTH trust surface from 7cdafb30 to
6c3ae920 (= anubis-lang 0ad40aaf: 6aa6fd92 v3-emitter + host-honest `anubis doctor`,
main.rs only), double-built byte-identical, proven a drop-in (program-evidence for
verified_loop.anb is byte-identical to 7cdafb30 after scrubbing volatile fields).

Re-pinned (host-aware; Darwin 0d6a8f89 + Z3 anchors + inventory-safe-v1 body 1b94350a
untouched):
  - tools/anubis_program_verify.py APPROVED_CHECK_COMPILER_LINUX_AARCH64_SHA256
  - release/evidence/approved_check_compiler.linux-aarch64 (marker)
  - release/MANIFEST.linux-aarch64.sha256 (approved-check-compiler row via repin_linux)
  - release/build_package_linux.sh APPROVED_CC_SHA256 (next package build)
  - release/evidence/anubis_program_dogfood_linux_aarch64_v1.json (designation; the
    v1.7.3 tarball's shipped_check_compiler stays 7cdafb30 — honest as-shipped)
  - OMARCHY_BUILD.md

Incidental: repin_linux also rebound MANIFEST `compiler_pin` c6affa8c -> 2704f083, the
now-doctor-honest language anubis at ~/.local/bin/anubis (jackal-native re-builds with it
at V111). Consistent with adopting the doctor-honest toolchain.

Verification (this box): direct frozen verifier -> verified-program-evidence, 4 proofs
(receipt 46c7b357) for 6c3ae920; REFUSES 7cdafb30 (compiler-not-approved). Gate-green:
235/235 codex_plugin tests (1 skip), plugin_identity=verified, CAPABILITY_DRIFT_PASS,
repin_linux --check MATCH.

Deployment: source-ahead-of-deployment by design. The provisioned v1.7.3 runtime + MCP
surface + hermes bundle still verify the deployed 7cdafb30 and re-provision to 6c3ae920
at the V111 repackage (which regenerates the hermes bundle identity). Not pushed.

Co-Authored-By: Claude Opus 5 (1M context) <noreply@anthropic.com>
# Conflicts:
#	plugins/jackel/.codex-plugin/plugin.json
#	plugins/jackel/PLUGIN_IDENTITY.sha256
#	plugins/jackel/skills/jackel/SKILL.md
#	tools/capability_drift_gate.py
@coderabbitai

coderabbitai Bot commented Aug 29, 2026

Copy link
Copy Markdown

Important

  • 🔍 Trigger review

This repository does not receive automatic reviews because it has fewer than 10 stars.

⚙️ Run configuration

Configuration used: defaults

Review profile: CHILL

Plan: Pro Plus

Run ID: ee2e1fe1-27bb-4f9f-b899-b82709389703


Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share

Comment @coderabbitai help to get the list of available commands.

@AnubisQuantumCipher

Copy link
Copy Markdown
Owner Author

Final current-head evidence audit

Exact head audited: 6c733351d996aafdf2e60984376fb25a0a32c27a.

Hosted evidence

  • Every reported PR check on this exact head is pass/SUCCESS; none is pending or failed.
  • The full certificate campaign completed successfully, including:
    • exact-revision checkout;
    • pinned Lean checker build;
    • source proof-closure and admission checks;
    • private fresh platform-local proof identity and exact pins;
    • complete witness generation and formal checker acceptance;
    • independent checker, interval-chain, and validation replay;
    • source/witness mutation A-B-A rejection-and-restoration campaign;
    • evidence-manifest reproduction from exact staged bytes;
    • full witness and receipt byte-for-byte reproduction;
    • bounded non-publication artifact upload.
  • Hosted SPARK Platinum component jobs pass on both workflow surfaces.
  • Hosted Gaussian/range Lean closure and axiom-audit jobs pass on both workflow surfaces.
  • Hosted Linux aarch64 and macOS arm64 plugin gates pass on both workflow surfaces.
  • Hosted claim-kernel admission/surface-lock jobs pass on both workflow surfaces.
  • CodeRabbit reports a passing status because review was skipped and manual review is required; there is no CodeRabbit code review or human review to claim.

Local current-head evidence

  • Complete Codex plugin suite: Ran 304 tests; OK (skipped=1). The skip is the expected /bin/zsh launcher case on this host.
  • HELLGATE interval SPARK component: all 55 reported checks proved.
  • Claim-policy SPARK component: all 18 reported checks proved.
  • Exhaustive Python/SPARK conformance bridge passes over the declared finite domains.
  • git diff --check and JACKAL_ASSURANCE_TRACEABILITY_PASS pass.
  • The branch is clean and byte-aligned with origin/feat/platinum-thoth-integration at the exact head above.

Companion Omarchy release

  • JACKAL Omarchy Edition v2.6.3 is published from 2aa8b3614409c53e3058339fed27f45c97d6309f with its tag-triggered assurance/reproduction workflow passing.
  • The marketplace submission is open and carries submission and validated; human listing approval remains pending.

Assurance boundary

“Platinum” is intentionally component-scoped to the two declared SPARK kernels and their allocated finite-domain requirements. This does not establish universal correctness of the complete JACKAL/THOTH product, Python/QML/JavaScript/shell code, compilers, source-to-native refinement, operating system, hardware, sensors, or physical models. HELLGATE E0 remains bounded, not formal-bounded, and the challenge parts not covered by its certificate remain unproved. The uploaded artifact is explicitly non-publication platform-local logging, not an authority for widening verification expectations.

@AnubisQuantumCipher
AnubisQuantumCipher merged commit 2d425e7 into master Aug 29, 2026
12 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant