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Cestovatels/README.md

Hi there! 👋 I'm Berk Gezgin

AI Engineer · Computer Vision · Medical Imaging · Deep Learning

AI Engineer at CranioCatch, building end-to-end computer vision pipelines for clinical environments.
I work with DICOM, NIfTI, 2D radiographs, and intraoral images — from raw data to production-ready diagnostic tools actively used in real clinical settings.

🔬 What I Work On

  • 3D/2D segmentation, detection & landmark detection on CT volumes and dental X-rays (Panoramic, Bitewing, Periapical, Lateral Cephalometric)
  • Automated clinical report generation (paranasal airway volumetrics, TMJ assessment, implant evaluation, third molar classification)
  • Bone loss quantification & clinically accurate periodontal measurement algorithms
  • Facial soft tissue measurement pipelines from Smile / Rest / Profile photographs
  • DICOM–STL registration workflows for anatomical consistency across modalities
  • End-to-end automated training pipelines covering dataset preprocessing, train/validation/test split, model training, evaluation, and structured reporting — fully automated from raw data to final results

🛠 Tech Stack

Training & Modeling
PyTorch nnU-Net MONAI YOLOv8 Mask R-CNN TensorFlow

Medical Data
pydicom NiBabel SimpleITK Open3D 3DSlicer

Vision & Processing
OpenCV Albumentations NumPy SciPy scikit-image Matplotlib

Languages & Tools
Python Git

📌 Featured Projects

Project Description Stack
CephaloHRNet End-to-end HRNet cephalometric landmark detection with full training, evaluation & inference pipeline Python · PyTorch · HRNet
YOLO-Pipeline-Auto End-to-end automated YOLO training pipeline with dataset preprocessing, training, evaluation & reporting Python · YOLOv8
Vehicle-License-Plate-Recognition-System Complete ALPR system with detection, tracking, OCR & visualization Python · OpenCV

📊 GitHub Stats

📫 Contact

Open to collaboration on computer vision & medical AI projects & AI projects

Popular repositories Loading

  1. YOLO-Pipeline-Auto YOLO-Pipeline-Auto Public

    End-to-end automated YOLO training pipeline with built-in dataset preprocessing, training, evaluation, and reporting.

    Python 7 1

  2. Vehicle-License-Plate-Recognition-System Vehicle-License-Plate-Recognition-System Public

    A complete vehicle and license plate recognition system with detection, tracking, OCR, and visualization.

    Python 7 1

  3. CephaloHRNet CephaloHRNet Public

    End-to-end HRNet for cephalometric landmark detection — clean CLI, multi-annotator support, full evaluation pipeline

    Python 3

  4. CatchTheRickAndMorty CatchTheRickAndMorty Public

    a little catch game with gifs

    Java

  5. Iris-preprocessing-XGBoost Iris-preprocessing-XGBoost Public

    Iris preprocessing and predict with XGBoost

    Jupyter Notebook

  6. Cestovatels Cestovatels Public