PSSBtrends

Script to generate B-IBI scores and trends from taxonomy data downloaded from Puget Sound Stream Benthos database

Name		Name	Last commit message	Last commit date
Inputs		Inputs
Scripts		Scripts
output2025-04-08		output2025-04-08
output2025-11-19		output2025-11-19
.gitignore		.gitignore
B-IBI score and trends R code.Rproj		B-IBI score and trends R code.Rproj
B-IBI_results_PSSB_Scores.csv		B-IBI_results_PSSB_Scores.csv
OverallScores_Sites_PSSB.png		OverallScores_Sites_PSSB.png
README.md		README.md
RKT_overall_trends_PSSB.csv		RKT_overall_trends_PSSB.csv
Site.Code_abundance_trends_density.csv		Site.Code_abundance_trends_density.csv
Site.Code_pres-abs_density.csv		Site.Code_pres-abs_density.csv
SiteScores_PSSB.png		SiteScores_PSSB.png
Site_Trends_coarse_PSSB.csv		Site_Trends_coarse_PSSB.csv
SubbasinRKTtrend_PSSB.png		SubbasinRKTtrend_PSSB.png
Subbasin_RKTtrends_PSSB.csv		Subbasin_RKTtrends_PSSB.csv
Subbasin_Spread_trends_density.csv		Subbasin_Spread_trends_density.csv
Subbasin_abundance_trends.csv		Subbasin_abundance_trends.csv
Trend_watershed_RKTtrends_PSSB.csv		Trend_watershed_RKTtrends_PSSB.csv
WatershedRKTtrend_PSSB.png		WatershedRKTtrend_PSSB.png
cumulative_samples_timeline.R		cumulative_samples_timeline.R
dpac_out.csv		dpac_out.csv
freq_of_occurrence_density.csv		freq_of_occurrence_density.csv
region_pres-abs_density.csv		region_pres-abs_density.csv
regionwide_abundance_trends.csv		regionwide_abundance_trends.csv
score_RKTtrend_summarized_by_site_PSSB.csv		score_RKTtrend_summarized_by_site_PSSB.csv
score_RKTtrend_summarized_by_subbasin_PSSB.csv		score_RKTtrend_summarized_by_subbasin_PSSB.csv
score_RKTtrend_summarized_by_watershed_PSSB.csv		score_RKTtrend_summarized_by_watershed_PSSB.csv

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