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stable-grn-inference
stable-grn-inference PublicA regime-by-regime study of when a directed gene-regulatory edge can be recovered from expression data, and why it usually cannot. Fair baselines, confound audits, and a phase-diagram explanation a…
Python
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structured-transform-discovery
structured-transform-discovery PublicControlled benchmarks for latent factor recovery, transfer, and leakage using wavelet/scattering and learned representations.
Python
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mechanistic-model-inference
mechanistic-model-inference PublicParameter identifiability and inference for mechanistic ODE models of gene and protein dynamics: which parameters are recoverable from noisy data, how well, and from what measurements.
Python
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