Pinned Loading

1. CellPhenTracker CellPhenTracker Public

   Set of OrganoidTracker plugins to measure and analyse fluorescent intensities.

   Python

2. NuclearIDTracker NuclearIDTracker Public

   Predicts cell types based on nucleus features (morphology, neighborhood). Allows for observing cell types in mouse small intestinal organoid time lapses.

   Jupyter Notebook

3. KaryoMetab KaryoMetab Public

   Reproducible computational workflow for the joint inference of chromosomal instability (CIN) patterns and metabolic states from single-cell RNA-seq data

   R 2