Add autogen for AMDC article in control with AMDC folder

[Daehoon-Sung]

This is to close #143 to close #149 to close https://github.com/Severson-Group/AMDC-Examples/issues/6.

Notes

This comment might be useful to refer to how we came up with the plan for those two ariticles.

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Standard checklist

1. Are all files under 300 kB (if not, please carefully assess whether it is worth committing them)? **Yes or No**
2. Are all files named according to the appropriate [naming convention](https://github.com/Severson-Group/research-repo-template?tab=readme-ov-file#file-naming), i.e., dash-case, camelCase, snake case? **Yes or No**
3. Do all Markdown files follow the [CONTRIBUTING article template](https://github.com/Severson-Group/.github/blob/main/CONTRIBUTING.md#markdown-documentation-template)? **Yes or No**
4. Do all links work in the material that the PR is adding? **Yes or No**
5. Is the PR configured to close the correct issue(s)? **Yes or No**
6. Did the PR fully address the `Approach` section of the issue(s) it is closing? **Yes or No**

Please work on addressing any **No** items.

[noguchi-takahiro]

Hello @elsevers, the AMDC article of Autogen is ready. See the following rendered articles:

• Article: Control with AMDC Using Simulink Autogen.pdf
• Tutorial: Tutorial_ Autogen - AMDC Platform.pdf).

I think we can have better block diagram for the article, but we can discuss.

[noguchi-takahiro]

Hello @elsevers, I updated the file organization for autogen folder. See the following rendered articles:

• Article: Control with AMDC Using Simulink Autogen.pdf
• Tutorial: Tutorial_ Autogen - AMDC Platform.pdf.

[elsevers]

Thanks @noguchi-takahiro. I have it on my queue.

[elsevers]

Following up on out 5/11 meeting:

• Need to update simulink to follow new style guidelines
• Take a look at the top two discussions here: https://github.com/Severson-Group/AMDC-Examples/discussions . Do we need to update out article to factor any of this in?

[noguchi-takahiro]

Hello @elsevers, I have addressed the item 1 in this comment. See the following rendered articles:

• Article: Control with AMDC Using Simulink Autogen.pdf
• Tutorial: Tutorial_ Autogen - AMDC Platform.pdf

I also updated the index so that those contents show up on the left banner.

@Daehoon-Sung regarding the following comment, can you take a few minutes to review this discussion and make sure if we addressed all of these within the autogen article?

Take a look at the top two discussions here: https://github.com/Severson-Group/AMDC-Examples/discussions . Do we need to update out article to factor any of this in?

My takeaway is we already addressed these but I wanted to double check this with you.

[mhmokhtarabadi]

Thank you @Daehoon-Sung and @noguchi-takahiro for this nice article. I have some inline comments. Feel free to comment on what you think if you don't like my suggestions.

[mhmokhtarabadi]

@noguchi-takahiro, do you think we should follow PR https://github.com/Severson-Group/KnowledgeBase/pull/366 as the reference for naming the variables here?

[noguchi-takahiro]

Thank you @mhmokhtarabadi, can I request you to update naming convention for both setup.m and setup_model.slx and generate_duty.slx for me?

[noguchi-takahiro]

Thank you @mhmokhtarabadi. I addressed your feedback. Can you kindly update naming convention based on this latest article here or https://github.com/Severson-Group/KnowledgeBase/pull/366?