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Enable handling of .pb files
ci
#165:
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Change temp file name pattern for sanitized MAT
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Fixing special character problem for mac os
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Adding support for handling haplotype names with different characters…
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Add pip to dependencies for new conda recipe
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making sure that freyja's pip install -e only runs once in batch proc…
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Making sure WEPP doesn't crash when user gives TAXONIUM_FILE= in command
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Merge branch 'main' of https://github.com/TurakhiaLab/WEPP into main
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Fix bucket calculation to prevent out-of-bounds access
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Fix coverage map update logic in arena.cpp
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Fix bucket index calculation for true read counts
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Fixing text overlap in svg
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Update README with new publication badge
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Merge branch 'main' of https://github.com/TurakhiaLab/WEPP into main
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Improve formatting in citation section of README
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Updated citation to plos
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Making most dependencies flexible
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Updating ivar and samtools version to support macOS
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Adding optional --solver=libmamba in conda install for faster setup
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Reordering channels
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