Multi-plants

.github/workflows/CI.yml

@@ -75,3 +75,51 @@ jobs:
           using PlantSimEngine
           DocMeta.setdocmeta!(PlantSimEngine, :DocTestSetup, :(using PlantSimEngine); recursive=true)
           doctest(PlantSimEngine)
+  graph-editor-e2e:
+    name: Graph editor frontend and E2E
+    runs-on: ubuntu-latest
+    timeout-minutes: 30
+    permissions:
+      actions: write
+      contents: read
+    steps:
+      - uses: actions/checkout@v6
+      - uses: julia-actions/setup-julia@v3
+        with:
+          version: "1"
+      - uses: julia-actions/cache@v3
+      - name: Configure graph editor test environment
+        shell: julia --project=test --color=yes {0}
+        run: |
+          using Pkg
+          Pkg.develop(PackageSpec(path=pwd()))
+          Pkg.instantiate()
+      - uses: actions/setup-node@v4
+        with:
+          node-version: 22
+          cache: npm
+          cache-dependency-path: frontend/package-lock.json
+      - name: Install frontend dependencies
+        working-directory: frontend
+        run: npm ci
+      - name: Check and build frontend
+        working-directory: frontend
+        run: |
+          npm run typecheck
+          npm test
+          npm run build
+      - name: Install Chromium
+        working-directory: frontend
+        run: npx playwright install --with-deps chromium
+      - name: Run graph editor end-to-end tests
+        working-directory: frontend
+        run: npm run test:e2e
+      - name: Upload Playwright report on failure
+        if: failure()
+        uses: actions/upload-artifact@v4
+        with:
+          name: graph-editor-playwright-report
+          path: |
+            frontend/playwright-report
+            frontend/test-results
+          if-no-files-found: ignore

.gitignore

@@ -7,4 +7,7 @@ docs/Manifest.toml
 test/Manifest.toml
 docs/build/
 benchmark/Manifest.toml
-frontend
+/frontend/node_modules/
+/frontend/.vite/
+/frontend/test-results/
+/frontend/playwright-report/

CHANGELOG.md

@@ -1,5 +1,27 @@
 # Changelog
 
+## v0.15.0
+
+### Breaking changes
+
+- Hard dependencies now execute through
+  `run_call!(context::RunContext, name::Symbol; ...)`, which executes every
+  selector-resolved target and always returns a vector-like `CallTargets`
+  collection.
+- The singular hard-call accessor and string-name hard-call methods were
+  removed. Use `only(call_targets(context, :name))` for fine-grained access to
+  a `One` dependency.
+- Direct recursive dependency execution is no longer supported. Model kernels
+  must run inside a compiled `CompositeModel` and receive a `RunContext`.
+
+### Added
+
+- `CallTargets`, a cached `AbstractVector` view over compiled hard-call targets
+  that is allocation-free to retrieve.
+- `run_call!(context, name)` for the common execute-all operation while
+  retaining `run_call!(target::CallTarget)` for selective, per-target, and
+  iterative control.
+
 ## v0.14.0
 
 Changes in this section are based on the git history since [`v0.13.2`](https://github.com/VirtualPlantLab/PlantSimEngine.jl/releases/tag/v0.13.2), corresponding to the GitHub compare view for [`v0.14.0`](https://github.com/VirtualPlantLab/PlantSimEngine.jl/compare/v0.13.2...v0.14.0).
@@ -21,7 +43,7 @@ and substantially expands the documentation.
 The main user-facing breaking change in this release is the move toward
 `Symbol`-based scale names in mappings and multi-scale configuration. Code that
 still uses string scales such as `"Leaf"` or `"Plant"` should be updated to use
-symbols such as `:Leaf` and `:Plant`, especially in `ModelMapping(...)`,
+symbols such as `:Leaf` and `:Plant`, especially in `PlantSimEngine.ModelMapping(...)`,
 `MultiScaleModel(...)`, and explicit multi-rate bindings. `ModelList` is also on
 the deprecation path in favor of `ModelMapping`, so this release is a good time
 to migrate mapping code to the newer API.
@@ -77,12 +99,12 @@ to migrate mapping code to the newer API.
 
 ### Deprecated
 
-- `run!(::ModelList, ...)` is deprecated. Use `run!(ModelMapping(...), ...)`
+- `run!(::ModelList, ...)` is deprecated. Use `run!(PlantSimEngine.ModelMapping(...), ...)`
   instead.
 - `run!` with collections of `ModelList` is deprecated. Use collections of
   `ModelMapping` instead.
 - `run!(mtg, mapping::AbstractDict, ...)` is deprecated. Construct a
-  `ModelMapping(...)` first, or call `run!(mtg, ModelMapping(mapping), ...)`.
+  `PlantSimEngine.ModelMapping(...)` first, or call `run!(mtg, PlantSimEngine.ModelMapping(mapping), ...)`.
 - String scale names are deprecated in multi-scale mapping APIs. Use `Symbol`
   scales such as `:Leaf` instead of `"Leaf"`.
 - `ModelList` remains available for now but is being phased out in favor of
@@ -93,7 +115,7 @@ to migrate mapping code to the newer API.
 #### 1. Replace ad hoc mappings with `ModelMapping`
 
 If you previously used `ModelList(...)` directly for single-scale runs, or a
-plain `Dict` for MTG runs, migrate to `ModelMapping(...)`.
+plain `Dict` for MTG runs, migrate to `PlantSimEngine.ModelMapping(...)`.
 
 Before:
 
@@ -113,13 +135,13 @@ mapping = Dict(
 After:
 
 ```julia
-leaf = ModelMapping(
+leaf = PlantSimEngine.ModelMapping(
     process1 = Process1Model(),
     process2 = Process2Model(),
     status = (x = 1.0,),
 )
 
-mapping = ModelMapping(
+mapping = PlantSimEngine.ModelMapping(
     :Leaf => (ToyAssimModel(),),
     :Plant => (ToyGrowthModel(),),
 )
@@ -133,7 +155,7 @@ When a model should run at a cadence different from the meteo, wrap it in
 Typical pattern:
 
 ```julia
-mapping = ModelMapping(
+mapping = PlantSimEngine.ModelMapping(
     :Leaf => (
         ModelSpec(HourlyLeafModel()) |> TimeStepModel(1.0),
     ),
@@ -180,7 +202,7 @@ If your mappings still use string scales, migrate them to symbols.
 Before:
 
 ```julia
-mapping = ModelMapping(
+mapping = PlantSimEngine.ModelMapping(
     "Leaf" => (ToyAssimModel(),),
 )
 
@@ -191,7 +213,7 @@ MultiScaleModel([:A => "Leaf"])
 After:
 
 ```julia
-mapping = ModelMapping(
+mapping = PlantSimEngine.ModelMapping(
     :Leaf => (ToyAssimModel(),),
 )
 

Project.toml

@@ -1,34 +1,37 @@
 name = "PlantSimEngine"
 uuid = "9a576370-710b-4269-adf9-4f603a9c6423"
-version = "0.14.0"
+version = "0.15.0"
 authors = ["Rémi Vezy <VEZY@users.noreply.github.com> and contributors"]
 
 [deps]
-AbstractTrees = "1520ce14-60c1-5f80-bbc7-55ef81b5835c"
 CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
-DataAPI = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a"
 DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
 Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
-FLoops = "cc61a311-1640-44b5-9fba-1b764f453329"
+InteractiveUtils = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
+JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
 Markdown = "d6f4376e-aef5-505a-96c1-9c027394607a"
 MultiScaleTreeGraph = "dd4a991b-8a45-4075-bede-262ee62d5583"
 PlantMeteo = "4630fe09-e0fb-4da5-a846-781cb73437b6"
-SHA = "ea8e919c-243c-51af-8825-aaa63cd721ce"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
 Term = "22787eb5-b846-44ae-b979-8e399b8463ab"
 
+[weakdeps]
+HTTP = "cd3eb016-35fb-5094-929b-558a96fad6f3"
+
+[extensions]
+PlantSimEngineGraphEditorExt = "HTTP"
+
 [compat]
-AbstractTrees = "0.4"
 CSV = "0.10"
-DataAPI = "1.15"
 DataFrames = "1"
 Dates = "1.10"
-FLoops = "0.2"
+InteractiveUtils = "1.10"
+JSON = "1.6.1"
+HTTP = "1"
 Markdown = "1.10"
 MultiScaleTreeGraph = "0.15.1"
 PlantMeteo = "0.8.2"
-SHA = "0.7.0"
 Statistics = "1.10"
 Tables = "1"
 Term = "2"