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Data Scientist
- Winnipeg, MB Canada
- in/justinzh
Popular repositories Loading
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bioinformatics_pipeline
bioinformatics_pipeline PublicAutomated, extensible bioinformatics pipelines for bulk and single-cell RNA-Seq analysis (QC, DESeq2, Seurat, annotation, visualization) with Snakemake. Designed for expansion to multi-omics, cloud…
Python 2
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epic-ehr-integration-platform
epic-ehr-integration-platform PublicEnterprise healthcare interoperability platform with FHIR R4, HL7 processing, and EPIC EHR integration using microservices architecture
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oncology-ai-insights
oncology-ai-insights PublicAI-powered dashboard and analytics platform for oncology real-world data (RWD). Demonstrates synthetic EHR, biomarker, and treatment data analysis using Streamlit, predictive modeling, and interact…
Jupyter Notebook 1
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fhir_omop_agent
fhir_omop_agent PublicLocal, modular FHIR → OMOP pipeline demo with LLM-powered mapping, QA profiling, Streamlit UI, and extensible architecture for clinical data engineering.
HTML 1
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QC-TLF-Python-Verification
QC-TLF-Python-Verification PublicDeterministic, reproducible Python scripts and workflows for independent QC of clinical Tables, Listings, and Figures (TLFs) from CDISC SDTM and ADaM datasets, matching SAS outputs. Includes sample…
Python 1
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ProjectGettingCleaningData
ProjectGettingCleaningData PublicCreate a tidy data set from Data Set of Human Activity Recognition Using Smartphones
R
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