chore(release): v0.8.0

exp/2025/10/22/inverse-flame/src/10-gen-forward.py

@@ -4,10 +4,10 @@
 import jax.numpy as jnp
 import pyvista as pv
 from jaxtyping import Array, Float, Integer
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.model import Forward, Model, ModelBuilder
+
+from liblaf import cherries, melon
 from liblaf.apple.warp import Phace
 
 

exp/2025/10/22/inverse-flame/src/10-gen-partial.py

@@ -5,9 +5,6 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
-
-from liblaf import cherries, grapes, melon
-from liblaf.apple import utils
 from liblaf.apple.consts import (
     ACTIVATION,
     DIRICHLET_MASK,
@@ -17,6 +14,9 @@
     MUSCLE_FRACTION,
 )
 
+from liblaf import cherries, grapes, melon
+from liblaf.apple import utils
+
 SUFFIX: str = env.str("SUFFIX", default="-515k")
 
 

exp/2025/10/22/inverse-flame/src/10-gen-sliding.py

@@ -5,9 +5,6 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
-
-from liblaf import cherries, grapes, melon
-from liblaf.apple import utils
 from liblaf.apple.consts import (
     ACTIVATION,
     DIRICHLET_MASK,
@@ -17,6 +14,9 @@
     MUSCLE_FRACTION,
 )
 
+from liblaf import cherries, grapes, melon
+from liblaf.apple import utils
+
 SUFFIX: str = env.str("SUFFIX", default="-515k")
 
 

exp/2025/10/22/inverse-flame/src/10-gen-thin.py

@@ -6,9 +6,6 @@
 import scipy
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
-
-from liblaf import cherries, grapes, melon
-from liblaf.apple import utils
 from liblaf.apple.consts import (
     ACTIVATION,
     DIRICHLET_MASK,
@@ -18,6 +15,9 @@
     MUSCLE_FRACTION,
 )
 
+from liblaf import cherries, grapes, melon
+from liblaf.apple import utils
+
 SUFFIX: str = env.str("SUFFIX", default="-123k")
 
 

exp/2025/10/22/inverse-flame/src/10-gen.py

@@ -5,9 +5,6 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
-
-from liblaf import cherries, grapes, melon
-from liblaf.apple import utils
 from liblaf.apple.consts import (
     ACTIVATION,
     DIRICHLET_MASK,
@@ -17,6 +14,9 @@
     MUSCLE_FRACTION,
 )
 
+from liblaf import cherries, grapes, melon
+from liblaf.apple import utils
+
 SUFFIX: str = env.str("SUFFIX", default="-68k-coarse")
 
 

exp/2025/10/22/inverse-flame/src/11-gen-manual.py

@@ -5,10 +5,10 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import ACTIVATION, POINT_ID
 from liblaf.apple.model import Forward, Model, ModelBuilder
+
+from liblaf import cherries, melon
 from liblaf.apple.warp import Phace
 
 

exp/2025/10/22/inverse-flame/src/20-coarse-to-fine.py

@@ -1,10 +1,10 @@
 from pathlib import Path
 
 import pyvista as pv
+from liblaf.apple.consts import ACTIVATION, POINT_ID
 
 from liblaf import cherries, melon
 from liblaf.apple import Forward, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, POINT_ID
 from liblaf.apple.warp import Phace
 
 

exp/2025/10/22/inverse-flame/src/20-inverse-adam-fine.py

@@ -9,14 +9,14 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
+from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.peach import tree
 from liblaf.peach.linalg import CompositeSolver
 from liblaf.peach.optim import PNCG, Optax, Optimizer
 from liblaf.peach.optim.abc import Callback
 
 from liblaf import cherries, grapes, melon
 from liblaf.apple import Forward, Inverse, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Vector = Float[Array, " N"]

exp/2025/10/22/inverse-flame/src/20-inverse-adam-old-hess.py

@@ -9,14 +9,14 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
+from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.peach import tree
 from liblaf.peach.linalg import CompositeSolver
 from liblaf.peach.optim import PNCG, Optax, Optimizer
 from liblaf.peach.optim.abc import Callback
 
 from liblaf import cherries, grapes, melon
 from liblaf.apple import Forward, Inverse, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Vector = Float[Array, " N"]

exp/2025/10/22/inverse-flame/src/20-inverse-adam-partial.py

@@ -9,14 +9,14 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
+from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.peach import tree
 from liblaf.peach.linalg import CompositeSolver
 from liblaf.peach.optim import PNCG, Optax, Optimizer
 from liblaf.peach.optim.abc import Callback
 
 from liblaf import cherries, grapes, melon
 from liblaf.apple import Forward, Inverse, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Vector = Float[Array, " N"]

exp/2025/10/22/inverse-flame/src/20-inverse-adam-stage-2.py

@@ -9,14 +9,14 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
+from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.peach import tree
 from liblaf.peach.linalg import CompositeSolver
 from liblaf.peach.optim import PNCG, Optax, Optimizer
 from liblaf.peach.optim.abc import Callback
 
 from liblaf import cherries, grapes, melon
 from liblaf.apple import Forward, Inverse, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Vector = Float[Array, " N"]

exp/2025/10/22/inverse-flame/src/20-inverse-adam.py

@@ -11,14 +11,14 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
+from liblaf.apple.consts import ACTIVATION, LAMBDA, MU, MUSCLE_FRACTION, POINT_ID
 from liblaf.peach import tree
 from liblaf.peach.linalg import CompositeSolver
 from liblaf.peach.optim import PNCG, Optax, Optimizer
 from liblaf.peach.optim.abc import Callback
 
 from liblaf import cherries, grapes, melon
 from liblaf.apple import Forward, Inverse, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, LAMBDA, MU, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Vector = Float[Array, " N"]

exp/2025/10/22/inverse-flame/src/20-inverse-lbfgs.py

@@ -9,13 +9,13 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Bool, Float, Integer
+from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.peach import tree
 from liblaf.peach.linalg import LinearSolver
 from liblaf.peach.optim import Optimizer, ScipyOptimizer
 
 from liblaf import cherries, grapes, melon
 from liblaf.apple import Forward, Inverse, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, MUSCLE_FRACTION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Vector = Float[Array, " N"]

exp/2025/10/22/inverse-flame/src/21-forward.py

@@ -4,11 +4,11 @@
 import jax.numpy as jnp
 import pyvista as pv
 from jaxtyping import Array, Float
+from liblaf.apple.consts import ACTIVATION, POINT_ID
 from liblaf.peach.optim import PNCG
 
 from liblaf import cherries, melon
 from liblaf.apple import Forward, Model, ModelBuilder
-from liblaf.apple.consts import ACTIVATION, POINT_ID
 from liblaf.apple.warp import Phace
 
 type Scalar = Float[Array, ""]

exp/2025/10/22/inverse-flame/src/21-inverse-inspect.py

@@ -4,9 +4,9 @@
 import numpy as np
 import pyvista as pv
 from jaxtyping import Array, Bool, Float
+from liblaf.apple.consts import ACTIVATION
 
 from liblaf import cherries, melon
-from liblaf.apple.consts import ACTIVATION
 from liblaf.apple.jax import make_activation
 
 

exp/2025/12/31/inverse-toy/src/10-gen-grid.py

@@ -3,8 +3,6 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Float, Integer
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import (
     ACTIVATION,
     DIRICHLET_MASK,
@@ -14,6 +12,8 @@
     MUSCLE_FRACTION,
 )
 
+from liblaf import cherries, melon
+
 
 class Config(cherries.BaseConfig):
     # lr=0.05 coarsen -> 4k-coarse

exp/2025/12/31/inverse-toy/src/10-gen.py

@@ -3,8 +3,6 @@
 import pyvista as pv
 from environs import env
 from jaxtyping import Array, Float, Integer
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import (
     ACTIVATION,
     DIRICHLET_MASK,
@@ -13,6 +11,8 @@
     MU,
 )
 
+from liblaf import cherries, melon
+
 
 class Config(cherries.BaseConfig):
     # lr=0.05 coarsen -> 4k-coarse

exp/2025/12/31/inverse-toy/src/20-forward-muscle.py

@@ -2,11 +2,11 @@
 import numpy as np
 import pyvista as pv
 from environs import env
+from liblaf.apple.consts import ACTIVATION, GLOBAL_POINT_ID, LAMBDA, MU, MUSCLE_FRACTION
+from liblaf.apple.model import Forward, Model, ModelBuilder
 from liblaf.peach.optim import PNCG
 
 from liblaf import cherries, melon
-from liblaf.apple.consts import ACTIVATION, GLOBAL_POINT_ID, LAMBDA, MU, MUSCLE_FRACTION
-from liblaf.apple.model import Forward, Model, ModelBuilder
 from liblaf.apple.warp import WarpArapMuscle
 
 

exp/2025/12/31/inverse-toy/src/20-forward-newton.py

@@ -2,11 +2,11 @@
 import numpy as np
 import pyvista as pv
 from environs import env
+from liblaf.apple.consts import ACTIVATION, LAMBDA, POINT_ID
+from liblaf.apple.model import Forward, Model, ModelBuilder
 from liblaf.peach.optim import ScipyOptimizer
 
 from liblaf import cherries, melon
-from liblaf.apple.consts import ACTIVATION, LAMBDA, POINT_ID
-from liblaf.apple.model import Forward, Model, ModelBuilder
 from liblaf.apple.warp import Phace
 
 

exp/2025/12/31/inverse-toy/src/20-forward-prestrain.py

@@ -5,18 +5,18 @@
 import pyvista as pv
 import warp as wp
 from environs import env
-from liblaf.peach.optim import PNCG, Objective, Optax, Optimizer, ScipyOptimizer
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import (
     ACTIVATION,
     GLOBAL_POINT_ID,
     LAMBDA,
     PRESTRAIN,
     STIFFNESS,
 )
-from liblaf.apple.jax import JaxMassSpringPrestrain
 from liblaf.apple.model import Forward, Model, ModelBuilder, ModelState
+from liblaf.peach.optim import PNCG, Objective, Optax, Optimizer, ScipyOptimizer
+
+from liblaf import cherries, melon
+from liblaf.apple.jax import JaxMassSpringPrestrain
 from liblaf.apple.warp import WarpPhaceV2
 
 wp.config.mode = "debug"

exp/2025/12/31/inverse-toy/src/20-forward.py

@@ -5,16 +5,16 @@
 import pyvista as pv
 import warp as wp
 from environs import env
-from liblaf.peach.optim import PNCG, Objective, Optax, Optimizer, ScipyOptimizer
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import ACTIVATION, GLOBAL_POINT_ID, LAMBDA
 from liblaf.apple.model import Forward, Model, ModelBuilder, ModelState
 from liblaf.apple.warp.energies.elastic import (
     # WarpArapMuscle,
     WarpPhaceV2,
     # WarpVolumePreservationDeterminant,
 )
+from liblaf.peach.optim import PNCG, Objective, Optax, Optimizer, ScipyOptimizer
+
+from liblaf import cherries, melon
 
 wp.config.mode = "release"
 # wp.config.print_launches = True

exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-easy-metrics.json

@@ -26,4 +26,4 @@
     "forward_best_objective": 1481.1424852869957,
     "finite_outputs": true
   }
-]
+]

exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-easy.json

@@ -38,4 +38,4 @@
     "adjoint-relative-residual": "/home/liblaf/github/liblaf/apple/exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-easy-metrics-adjoint-relative-residual.png",
     "inverse-grad-absolute": "/home/liblaf/github/liblaf/apple/exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-easy-metrics-inverse-grad-absolute.png"
   }
-}
+}

exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-zero-metrics.json

@@ -404,4 +404,4 @@
     "forward_best_objective": 1485.5675728610533,
     "finite_outputs": true
   }
-]
+]

exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-zero.json

@@ -43,4 +43,4 @@
     "adjoint-relative-residual": "/home/liblaf/github/liblaf/apple/exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-zero-metrics-adjoint-relative-residual.png",
     "inverse-grad-absolute": "/home/liblaf/github/liblaf/apple/exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean-zero-metrics-inverse-grad-absolute.png"
   }
-}
+}

exp/2026/01/28/smas/data/31-inverse-smas46-muscle46-activation-stable-neo-hookean.json

@@ -88,4 +88,4 @@
       }
     }
   ]
-}
+}

exp/2026/01/28/smas/src/10-gen-conform.py

@@ -1,8 +1,6 @@
 import numpy as np
 import pyvista as pv
 from environs import env
-
-from liblaf import cherries, melon
 from liblaf.apple.consts import (
     DIRICHLET_MASK,
     DIRICHLET_VALUE,
@@ -11,6 +9,8 @@
     SMAS_FRACTION,
 )
 
+from liblaf import cherries, melon
+
 
 class Config(cherries.BaseConfig):
     coarsen: bool = env.bool("COARSEN", False)