Add "dash" options to the bash scripts, and some additional refactoring - #15

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mpaiao wants to merge 24 commits into

monanadmin:developfrom

mpaiao:use_dash-develop

Commits on Jan 26, 2026

Multiple edits to the CD-CT scripts, mostly minor.
mpaiao
committed
a60d8e5

Commits on Jan 27, 2026

Some additional features:
mpaiao
committed
2163e7d
Some options do not seem to be working. Add more context to the error message.
mpaiao
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36c2faa
I edited every setenv.bash call so all of them load the MONAN_ONETWO flag, and edited
mpaiao
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3ef8a38
Remove if statement from setenv.bash, and try to edit MONAN's Makefile instead.
mpaiao
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494e94d
Bug fix, variable DIRDADOS is no longer defined in setenv.bash, so INPUT_PATH must update
mpaiao
committed
10cf56b
Somehow step 2 is not running due to paths being incorrect on jaci.
mpaiao
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856b26b
Add config_lsm_scheme to the default namelist (so it is easier to change when switching
mpaiao
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2ddb0e8

Commits on Jan 28, 2026

Add a bit more information on MONAN when checking for compatibility with scripts_CD-CT.
mpaiao
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b886961

Commits on Jan 29, 2026

Commits on Feb 2, 2026

Commits on Mar 17, 2026

Added dot and slash before the call to scripts.
mpaiao
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00b4f46

Commits on Apr 9, 2026

Added missing default resolutions to make_template.bash
mpaiao
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ec774aa

Commits on Jun 26, 2026

Add files for MONAN's surface group.
mpaiao
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3c8000a
Make Noah-MP the default surface model.
mpaiao
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239704c
Add cumulative fluxes to both SFC variable lists.
mpaiao
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78ae37b

Commits on Aug 7, 2026

Fix typo in namelist.
mpaiao
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6efe861

Commits on Aug 14, 2026

Add flexible soil layers to namelist.init_atmosphere.* files.
mpaiao
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bab4a52
Fix the configurations for heterogeneous soil colours.
mpaiao
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d681417
Add soil colour flag to the default surface output.
mpaiao
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5c1ec74