homebrew-ecell

Homebrew Formulas to install E-Cell3 and related packages.

• E-Cell3 3.2.8

Install

Install Homebrew

Homebrew web site

Install brewed Python2

brew install python@2

Install required Python packages

pip install --upgrade pip setuptools
pip install numpy ply python-libsbml

Install Python packages required for ecell3-jupyter

pip install matplotlib scipy sympy
pip install ipython[all]

Install E-Cell3

brew tap naito/ecell
brew install ecell3

Update

brew update
brew upgrade ecell3

Note

Typically installed in /usr/local/Cellar/ecell3/3.2.7d_2 Formula files are typically installed in /usr/local/Homebrew/Library/Taps/naito/homebrew-ecell