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    12 repositories

    • MACSimaXenium

      Public
      Python
      •
      GNU Affero General Public License v3.0
      •0•1•2•0•Updated Jul 7, 2026Jul 7, 2026

    • sdata_workshop

      Public
      Workshop on SpatialData registration and visualization
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•5•0•0•Updated Mar 11, 2026Mar 11, 2026

    • comet_tools

      Public
      Script to register and merge OME-TIFF files derived from interrupted COMET runs.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jan 3, 2026Jan 3, 2026

    • MultimodalRegistration

      Public
      Scritps for processing and viewing datasets from Xenium + CODEX/COMET experiments
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Nov 27, 2025Nov 27, 2025

    • sopa_comet_analysis

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 20, 2025Sep 20, 2025

    • xenium_processing

      Public
      Python
      •1•1•0•0•Updated Aug 7, 2025Aug 7, 2025

    • spatial_analysis

      Public
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •0•2•0•0•Updated May 8, 2025May 8, 2025

    • spatial_qc

      Public
      R
      •0•0•0•0•Updated Mar 29, 2024Mar 29, 2024

    • resolve_processing_singularity_container

      Public
      0•0•0•0•Updated Mar 21, 2024Mar 21, 2024

    • resolve_processing

      Public
      Python
      •0•1•0•0•Updated Mar 21, 2024Mar 21, 2024

    • seurat_resolve_importer

      Public
      R
      •0•0•0•0•Updated Mar 21, 2024Mar 21, 2024

    • geojson_seurat_cropper

      Public
      R
      •0•2•0•0•Updated Mar 20, 2024Mar 20, 2024
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