ci(deps): bump the r-lib-actions group with 4 updates

[dependabot]

Bumps the r-lib-actions group with 4 updates: r-lib/actions/setup-pandoc, r-lib/actions/setup-r, r-lib/actions/setup-r-dependencies and r-lib/actions/check-r-package.

Updates r-lib/actions/setup-pandoc from 2.12.0 to 2.12.1

Changelog

Sourced from r-lib/actions/setup-pandoc's changelog.

v2.12.1 (2026-06-23)

• [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

• [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

• Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

• New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

• All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

• [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

• It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

• [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

• [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

• [setup-r] run apt-get update without -qq on Linux, to make debugging update failures easier (#1058).

v2.11.4 (2025-10-08)

• [setup-r] correctly installs Rtools again on aarch64 Windows, as needed.

v2.11.3 (2025-03-24)

• [setup-r] now supports Rtools45, and installs it by default for R >= 4.5.0.

v2.11.2 (2025-02-19)

• [setup-r] now installs gfortran 14.2 for R 4.5.0 and later (#965).

• [setup-r] now does not use PPM on aarch64 Linux, because PPM

... (truncated)

Commits

• d3c5be5 Update NEWS for v1.12.1 (#1087)
• 0d1fbb4 Add /investigate workflow (#1084)
• ed1849b Use codecov/codecov-action v7 (#1082)
• 173cb9d Update lock-threads and scorecard action versions
• 2e3959d Update quarto-dev/quarto-actions/setup to v2.2.0 (#1076)
• ff9d3a3 [setup-r] avoid typed-rest-client (#1075)
• 122fa05 Fix typo (#1073)
• See full diff in compare view

Updates r-lib/actions/setup-r from 2.12.0 to 2.12.1

Changelog

Sourced from r-lib/actions/setup-r's changelog.

v2.12.1 (2026-06-23)

• [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

• [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

• Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

• New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

• All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

• [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

• It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

• [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

• [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

• [setup-r] run apt-get update without -qq on Linux, to make debugging update failures easier (#1058).

v2.11.4 (2025-10-08)

• [setup-r] correctly installs Rtools again on aarch64 Windows, as needed.

v2.11.3 (2025-03-24)

• [setup-r] now supports Rtools45, and installs it by default for R >= 4.5.0.

v2.11.2 (2025-02-19)

• [setup-r] now installs gfortran 14.2 for R 4.5.0 and later (#965).

• [setup-r] now does not use PPM on aarch64 Linux, because PPM

... (truncated)

Commits

• d3c5be5 Update NEWS for v1.12.1 (#1087)
• 0d1fbb4 Add /investigate workflow (#1084)
• ed1849b Use codecov/codecov-action v7 (#1082)
• 173cb9d Update lock-threads and scorecard action versions
• 2e3959d Update quarto-dev/quarto-actions/setup to v2.2.0 (#1076)
• ff9d3a3 [setup-r] avoid typed-rest-client (#1075)
• 122fa05 Fix typo (#1073)
• See full diff in compare view

Updates r-lib/actions/setup-r-dependencies from 2.12.0 to 2.12.1

Changelog

Sourced from r-lib/actions/setup-r-dependencies's changelog.

v2.12.1 (2026-06-23)

• [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

• [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

• Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

• New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

• All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

• [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

• It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

• [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

• [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

• [setup-r] run apt-get update without -qq on Linux, to make debugging update failures easier (#1058).

v2.11.4 (2025-10-08)

• [setup-r] correctly installs Rtools again on aarch64 Windows, as needed.

v2.11.3 (2025-03-24)

• [setup-r] now supports Rtools45, and installs it by default for R >= 4.5.0.

v2.11.2 (2025-02-19)

• [setup-r] now installs gfortran 14.2 for R 4.5.0 and later (#965).

• [setup-r] now does not use PPM on aarch64 Linux, because PPM

... (truncated)

Commits

• d3c5be5 Update NEWS for v1.12.1 (#1087)
• 0d1fbb4 Add /investigate workflow (#1084)
• ed1849b Use codecov/codecov-action v7 (#1082)
• 173cb9d Update lock-threads and scorecard action versions
• 2e3959d Update quarto-dev/quarto-actions/setup to v2.2.0 (#1076)
• ff9d3a3 [setup-r] avoid typed-rest-client (#1075)
• 122fa05 Fix typo (#1073)
• See full diff in compare view

Updates r-lib/actions/check-r-package from 2.12.0 to 2.12.1

Changelog

Sourced from r-lib/actions/check-r-package's changelog.

v2.12.1 (2026-06-23)

• [setup-r] now avoids a warning about an url.parse() deprecation (#1074).

• [setup-r-dependencies] now uses quarto-dev/quarto-actions v2.2.0 (@​jdblischak, #1076).

• Examples: test-coverage.yaml now uses codecov/codecov-action v7 (@​shikokuchuo, #1081).

• New example claude-investigate.yaml workflow (@​DavisVaughan, #1084).

v2.12.0 (2026-04-29)

• All node.js actions use node 24 now. Relatedly, all example workflows use recent versions of actions that use node 24.

• [setup-r] now uses use-public-rspm: true by default on Linux and Windows. macOS binaries require further opt-in with use-public-rspm: always.

• It is now possible to require actions to be pinned to a full-length commit SHA in repositories using r-lib/actions (#1070).

• [setup-pandoc][setup-r-dependencies] now default to Pandoc version 3.8.3.

• [setup-r-dependencies] now includes the R architecture in the cache key, so caches for macos-15 (Apple Silicon) and macos-15-intel (Rosetta/x86_64) no longer collide (#1035).

• [setup-r] run apt-get update without -qq on Linux, to make debugging update failures easier (#1058).

v2.11.4 (2025-10-08)

• [setup-r] correctly installs Rtools again on aarch64 Windows, as needed.

v2.11.3 (2025-03-24)

• [setup-r] now supports Rtools45, and installs it by default for R >= 4.5.0.

v2.11.2 (2025-02-19)

• [setup-r] now installs gfortran 14.2 for R 4.5.0 and later (#965).

• [setup-r] now does not use PPM on aarch64 Linux, because PPM

... (truncated)

Commits

• d3c5be5 Update NEWS for v1.12.1 (#1087)
• 0d1fbb4 Add /investigate workflow (#1084)
• ed1849b Use codecov/codecov-action v7 (#1082)
• 173cb9d Update lock-threads and scorecard action versions
• 2e3959d Update quarto-dev/quarto-actions/setup to v2.2.0 (#1076)
• ff9d3a3 [setup-r] avoid typed-rest-client (#1075)
• 122fa05 Fix typo (#1073)
• See full diff in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

• @dependabot rebase will rebase this PR
• @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
• @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
• @dependabot ignore <dependency name> major version will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself)
• @dependabot ignore <dependency name> minor version will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself)
• @dependabot ignore <dependency name> will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself)
• @dependabot unignore <dependency name> will remove all of the ignore conditions of the specified dependency
• @dependabot unignore <dependency name> <ignore condition> will remove the ignore condition of the specified dependency and ignore conditions

[dependabot]

Labels

The following labels could not be found: dependencies, github_actions. Please create them before Dependabot can add them to a pull request.

Please fix the above issues or remove invalid values from dependabot.yml.