Extract shared template utilities and replace print with logging#10
Merged
Conversation
Add a mode field (single or mixture) to the YAML config to distinguish between running adsorbates as independent single-component isotherms vs running them together as a mixture simulation with mole fractions.
…tion modules Add copy_template() and render_template() in matkit/utils/template.py and refactor graspa, raspa2, and graspa_sycl setup functions to use them instead of duplicated copy-and-substitute logic.
Replace all print() calls in library modules with logging.getLogger(__name__) calls at appropriate levels. Add -v/--verbose flag to the CLI (default WARNING, -v for INFO, -vv for DEBUG). Fix mace_opt.py to raise ValueError instead of returning "Error" string from a -> None function.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
copy_template()andrender_template()intomatkit/utils/template.py, eliminating duplicated template-copy-and-substitute code acrossgraspa,raspa2, andgraspa_syclmodulesprint()calls in library code withlogging.getLogger(__name__)and add-v/--verboseCLI flag (default WARNING,-vINFO,-vvDEBUG)mace_opt.pytype safety bug: now raisesValueErrorinstead of returning"Error"from a-> NonefunctionTest plan
ruff checkandruff format --checkpassmatkit graspa setupproduces identicalsimulation.inputoutputmatkit -v graspa setup ...shows info-level log messages