Add plot module, batch gRASPA setup, UMA batch, and zeopp#6
Merged
Conversation
Add run_opt_uma_batch() with queue-based multi-GPU execution using multiprocessing spawn context. Workers cache calculators per (model, task_name) to avoid reloading. Supports single file or directory input with Cartesian product of models x run_types. Includes separate fmax/fmax_cell parameters, results.jsonl output, and uma-opt-batch CLI command.
Support setting up simulations for all CIF x temperature x pressure combinations from a single call. Writes a simulations.jsonl manifest for downstream Parsl dispatch.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
setup_batch()for gRASPA: set up simulations across a CIF folder x temperature x pressure grid, withsimulations.jsonlmanifest for Parsl dispatchmatkit graspa batch-setupCLI command with repeatable--tempand--pressureflagsTest plan
matkit graspa batch-setup --helpshows all optionsmatkit mlip uma-opt-batch --helpshows all optionspytest tests/