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@veg

iGEM/UCSD evolutionary biology and bioinformatics group

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  1. hyphy hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    HyPhy 254 70

  2. hivtrace hivtrace Public

    JavaScript 22 14

  3. phylotree.js phylotree.js Public

    Interactive viewer of phylogenetic trees

    JavaScript 198 78

Repositories

Showing 10 of 104 repositories
  • datamonkey-js-server Public
    veg/datamonkey-js-server’s past year of commit activity
    JavaScript 3 7 0 2 Updated Apr 16, 2026
  • phylotree.js Public

    Interactive viewer of phylogenetic trees

    veg/phylotree.js’s past year of commit activity
    JavaScript 198 MIT 78 0 0 Updated Apr 15, 2026
  • datamonkey-js Public

    Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

    veg/datamonkey-js’s past year of commit activity
    JavaScript 10 9 0 1 Updated Apr 15, 2026
  • hivtrace-viz Public
    veg/hivtrace-viz’s past year of commit activity
    JavaScript 10 10 0 2 Updated Apr 14, 2026
  • hivtrace Public
    veg/hivtrace’s past year of commit activity
    JavaScript 22 MIT 14 5 0 Updated Apr 10, 2026
  • datamonkey-docs Public

    Documentation for Datamonkey/HyPhy

    veg/datamonkey-docs’s past year of commit activity
    TypeScript 0 1 0 0 Updated Apr 3, 2026
  • DRHIP Public

    Data Reduction for HyPhy with Inference Processing. A toolkit for analyzing and summarizing HyPhy evolutionary selection analysis results

    veg/DRHIP’s past year of commit activity
    Python 0 MIT 1 2 0 Updated Mar 27, 2026
  • hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    veg/hyphy’s past year of commit activity
    HyPhy 254 70 6 1 Updated Mar 23, 2026
  • hivclustering Public

    Infer molecular transmission networks from pairwise distance files (part of HIV-TRACE)

    veg/hivclustering’s past year of commit activity
    Python 5 4 9 1 Updated Mar 12, 2026
  • b-still Public

    B-STILL method data/scripts/reproducibility

    veg/b-still’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 9, 2026
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