This repository contains the codes implemented for scientific data visualization.
The codes in the 1000_soil_metagenome subfolder were implemented to process the metagenomics and the metabolomics data and visualize the results for the preparation of the manuscript.
If you have used any of these codes, please cite the following:
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Song Y et al. 2025. Continental-scale integration of soil metagenomes and metabolomes reveals ubiquitous microbial capacity for recalcitrant carbon decomposition. Preprint. https://doi.org/10.1101/2025.07.03.663048
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Degnan DJ et al. 2025. FREDA: A Web Application for the Processing, Analysis, and Visualization of Fourier-Transform Mass Spectrometry Data. Rapid Comm. Mass Spec. https://doi.org/10.1002/rcm.9980