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Replaces futures-based parallelization with BiocParallel #21

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Merged
amcim merged 3 commits into from
Apr 27, 2026
+573 −510
Merged

Replaces futures-based parallelization with BiocParallel #21

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b062fb2
Replace future/furr parallelism with BiocParallel
amcim Apr 21, 2026
997c58a
Style code (GHA)
amcim Apr 21, 2026
0291082
Replace apply variants with purrr; update deps
jananiravi Apr 25, 2026
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2 changes: 1 addition & 1 deletion .gitignore
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
.Rproj.user
.Rhistory
..Rcheck/
*.Rcheck/
.Rdata
.httr-oauth
.DS_Store
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6 changes: 2 additions & 4 deletions DESCRIPTION
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Expand Up @@ -29,13 +29,12 @@ URL: https://github.com/JRaviLab/amR_data
BugReports: https://github.com/JRaviLab/amR_data/issues
Imports:
arrow,
BiocParallel,
Biostrings,
DBI,
data.table,
dplyr,
duckdb,
furrr,
future,
future.apply,
glue,
purrr,
readr,
Expand All @@ -46,7 +45,6 @@ Imports:
biocViews: GenomeAssembly, Annotation, Sequencing
VignetteBuilder: knitr
Suggests:
Biostrings,
knitr,
rmarkdown,
testthat (>= 3.0.0)
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