tracking polymerization processes across a membrane through TIRF experiment data
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Updated
Apr 13, 2022 - MATLAB
tracking polymerization processes across a membrane through TIRF experiment data
A Python-based application for analyzing PIEZO1 protein distribution and membrane dynamics using TIRF microscopy data.
Python code created for the Pathak lab to help analyze TIRF recordings of PIEZO1.
The Cell Edge Detection System uses a U-Net architecture to detect cell edges in TIRF (Total Internal Reflection Fluorescence) and DIC (Differential Interference Contrast) microscopy images.
A MATLAB suite implementing computer vision pipeline to extract information from the noisy TIRF microscopy data (image stack)
An in-browser client-side IRM microtubule cleanup, detection, tracking and per-MT kymograph extraction.
TIRF microscope simulator
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